Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Top1mtQ8R4U6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Top1mtQ8R4U6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Top1mtQ8R4U6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Top1mtQ8R4U6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.53■■□□□ 1.2
Top1mtQ8R4U6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Top1mtQ8R4U6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Top1mtQ8R4U6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Top1mtQ8R4U6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Top1mtQ8R4U6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Top1mtQ8R4U6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Top1mtQ8R4U6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Top1mtQ8R4U6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC22.53■■□□□ 1.2
Top1mtQ8R4U6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Top1mtQ8R4U6 Gm9885-202ENSMUST00000186234 2209 ntBASIC22.53■■□□□ 1.2
Top1mtQ8R4U6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Top1mtQ8R4U6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Top1mtQ8R4U6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Top1mtQ8R4U6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Top1mtQ8R4U6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Top1mtQ8R4U6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Top1mtQ8R4U6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Top1mtQ8R4U6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC22.52■■□□□ 1.2
Top1mtQ8R4U6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Top1mtQ8R4U6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Top1mtQ8R4U6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Top1mtQ8R4U6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Top1mtQ8R4U6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Top1mtQ8R4U6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Top1mtQ8R4U6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Top1mtQ8R4U6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Top1mtQ8R4U6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
Top1mtQ8R4U6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
Top1mtQ8R4U6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Top1mtQ8R4U6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Top1mtQ8R4U6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Top1mtQ8R4U6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
Top1mtQ8R4U6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Top1mtQ8R4U6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC22.51■■□□□ 1.19
Top1mtQ8R4U6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Top1mtQ8R4U6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Top1mtQ8R4U6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Top1mtQ8R4U6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Top1mtQ8R4U6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC22.51■■□□□ 1.19
Top1mtQ8R4U6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Top1mtQ8R4U6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Top1mtQ8R4U6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Top1mtQ8R4U6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Top1mtQ8R4U6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Top1mtQ8R4U6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Top1mtQ8R4U6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Top1mtQ8R4U6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Top1mtQ8R4U6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.5■■□□□ 1.19
Top1mtQ8R4U6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Top1mtQ8R4U6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Top1mtQ8R4U6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Top1mtQ8R4U6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Top1mtQ8R4U6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Top1mtQ8R4U6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC22.49■■□□□ 1.19
Top1mtQ8R4U6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Top1mtQ8R4U6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Top1mtQ8R4U6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Top1mtQ8R4U6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Top1mtQ8R4U6 Gm13146-201ENSMUST00000118508 780 ntBASIC22.49■■□□□ 1.19
Top1mtQ8R4U6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Top1mtQ8R4U6 Gm10493-201ENSMUST00000097270 612 ntBASIC22.49■■□□□ 1.19
Top1mtQ8R4U6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Top1mtQ8R4U6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.49■■□□□ 1.19
Top1mtQ8R4U6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Top1mtQ8R4U6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC22.49■■□□□ 1.19
Top1mtQ8R4U6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Top1mtQ8R4U6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Top1mtQ8R4U6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Top1mtQ8R4U6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Top1mtQ8R4U6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC22.49■■□□□ 1.19
Top1mtQ8R4U6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Top1mtQ8R4U6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC22.49■■□□□ 1.19
Top1mtQ8R4U6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Top1mtQ8R4U6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.48■■□□□ 1.19
Top1mtQ8R4U6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Top1mtQ8R4U6 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Top1mtQ8R4U6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Top1mtQ8R4U6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22.48■■□□□ 1.19
Top1mtQ8R4U6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Top1mtQ8R4U6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Top1mtQ8R4U6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Top1mtQ8R4U6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Top1mtQ8R4U6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Top1mtQ8R4U6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC22.48■■□□□ 1.19
Top1mtQ8R4U6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Top1mtQ8R4U6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Top1mtQ8R4U6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Top1mtQ8R4U6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Top1mtQ8R4U6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Top1mtQ8R4U6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Top1mtQ8R4U6 Gm13234-201ENSMUST00000120010 747 ntBASIC22.47■■□□□ 1.19
Top1mtQ8R4U6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.47■■□□□ 1.19
Top1mtQ8R4U6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Top1mtQ8R4U6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC22.47■■□□□ 1.19
Top1mtQ8R4U6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms