Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.97■□□□□ 0.63
Slf1Q8R3P9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.97■□□□□ 0.63
Slf1Q8R3P9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Slf1Q8R3P9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slf1Q8R3P9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slf1Q8R3P9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slf1Q8R3P9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slf1Q8R3P9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slf1Q8R3P9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Slf1Q8R3P9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.97■□□□□ 0.63
Slf1Q8R3P9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Slf1Q8R3P9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slf1Q8R3P9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slf1Q8R3P9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Slf1Q8R3P9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slf1Q8R3P9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
Slf1Q8R3P9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Slf1Q8R3P9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.96■□□□□ 0.63
Slf1Q8R3P9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Slf1Q8R3P9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Slf1Q8R3P9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slf1Q8R3P9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slf1Q8R3P9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.96■□□□□ 0.63
Slf1Q8R3P9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slf1Q8R3P9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Slf1Q8R3P9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.95■□□□□ 0.62
Slf1Q8R3P9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slf1Q8R3P9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Slf1Q8R3P9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.95■□□□□ 0.62
Slf1Q8R3P9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Slf1Q8R3P9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Slf1Q8R3P9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slf1Q8R3P9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slf1Q8R3P9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slf1Q8R3P9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slf1Q8R3P9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slf1Q8R3P9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slf1Q8R3P9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Gm43530-201ENSMUST00000195920 274 ntBASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slf1Q8R3P9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slf1Q8R3P9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Slf1Q8R3P9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slf1Q8R3P9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slf1Q8R3P9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Slf1Q8R3P9 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.93■□□□□ 0.62
Slf1Q8R3P9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.93■□□□□ 0.62
Slf1Q8R3P9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slf1Q8R3P9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slf1Q8R3P9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Slf1Q8R3P9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slf1Q8R3P9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Slf1Q8R3P9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.93■□□□□ 0.62
Slf1Q8R3P9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Slf1Q8R3P9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Slf1Q8R3P9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Slf1Q8R3P9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Slf1Q8R3P9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slf1Q8R3P9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slf1Q8R3P9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Slf1Q8R3P9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slf1Q8R3P9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slf1Q8R3P9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slf1Q8R3P9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slf1Q8R3P9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slf1Q8R3P9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slf1Q8R3P9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.91■□□□□ 0.62
Slf1Q8R3P9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Slf1Q8R3P9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Slf1Q8R3P9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Slf1Q8R3P9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slf1Q8R3P9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
Slf1Q8R3P9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Slf1Q8R3P9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slf1Q8R3P9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slf1Q8R3P9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms