Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cystm1Q8K353 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cystm1Q8K353 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cystm1Q8K353 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Cystm1Q8K353 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cystm1Q8K353 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cystm1Q8K353 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC11.78□□□□□ -0.52
Cystm1Q8K353 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cystm1Q8K353 Gm18688-201ENSMUST00000204695 1859 ntBASIC11.78□□□□□ -0.52
Cystm1Q8K353 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cystm1Q8K353 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cystm1Q8K353 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.78□□□□□ -0.52
Cystm1Q8K353 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cystm1Q8K353 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cystm1Q8K353 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cystm1Q8K353 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cystm1Q8K353 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cystm1Q8K353 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC11.77□□□□□ -0.52
Cystm1Q8K353 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Cystm1Q8K353 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cystm1Q8K353 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cystm1Q8K353 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cystm1Q8K353 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cystm1Q8K353 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cystm1Q8K353 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cystm1Q8K353 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cystm1Q8K353 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cystm1Q8K353 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC11.77□□□□□ -0.53
Cystm1Q8K353 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC11.77□□□□□ -0.53
Cystm1Q8K353 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC11.77□□□□□ -0.53
Cystm1Q8K353 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC11.77□□□□□ -0.53
Cystm1Q8K353 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cystm1Q8K353 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cystm1Q8K353 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cystm1Q8K353 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cystm1Q8K353 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC11.77□□□□□ -0.53
Cystm1Q8K353 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cystm1Q8K353 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cystm1Q8K353 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cystm1Q8K353 Gm43294-201ENSMUST00000202850 2490 ntBASIC11.77□□□□□ -0.53
Cystm1Q8K353 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cystm1Q8K353 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cystm1Q8K353 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC11.77□□□□□ -0.53
Cystm1Q8K353 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cystm1Q8K353 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cystm1Q8K353 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Cystm1Q8K353 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cystm1Q8K353 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cystm1Q8K353 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cystm1Q8K353 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cystm1Q8K353 AC123834.2-201ENSMUST00000224038 2340 ntBASIC11.76□□□□□ -0.53
Cystm1Q8K353 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cystm1Q8K353 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cystm1Q8K353 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cystm1Q8K353 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cystm1Q8K353 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cystm1Q8K353 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cystm1Q8K353 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cystm1Q8K353 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cystm1Q8K353 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cystm1Q8K353 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cystm1Q8K353 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cystm1Q8K353 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cystm1Q8K353 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Gm10620-201ENSMUST00000098379 1332 ntBASIC11.75□□□□□ -0.53
Cystm1Q8K353 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cystm1Q8K353 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC11.75□□□□□ -0.53
Cystm1Q8K353 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cystm1Q8K353 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cystm1Q8K353 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms