Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mrpl47Q8K2Y7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mrpl47Q8K2Y7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mrpl47Q8K2Y7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl47Q8K2Y7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl47Q8K2Y7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Mrpl47Q8K2Y7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl47Q8K2Y7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl47Q8K2Y7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl47Q8K2Y7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl47Q8K2Y7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl47Q8K2Y7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.65■□□□□ 0.58
Mrpl47Q8K2Y7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl47Q8K2Y7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Mrpl47Q8K2Y7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Mrpl47Q8K2Y7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl47Q8K2Y7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl47Q8K2Y7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl47Q8K2Y7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mrpl47Q8K2Y7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Mrpl47Q8K2Y7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Mrpl47Q8K2Y7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mrpl47Q8K2Y7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mrpl47Q8K2Y7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Mrpl47Q8K2Y7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mrpl47Q8K2Y7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Mrpl47Q8K2Y7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mrpl47Q8K2Y7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Mrpl47Q8K2Y7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mrpl47Q8K2Y7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mrpl47Q8K2Y7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mrpl47Q8K2Y7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Mrpl47Q8K2Y7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mrpl47Q8K2Y7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mrpl47Q8K2Y7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Mrpl47Q8K2Y7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Mrpl47Q8K2Y7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mrpl47Q8K2Y7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mrpl47Q8K2Y7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.63■□□□□ 0.57
Mrpl47Q8K2Y7 Gm43137-201ENSMUST00000198052 594 ntBASIC18.63■□□□□ 0.57
Mrpl47Q8K2Y7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mrpl47Q8K2Y7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mrpl47Q8K2Y7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mrpl47Q8K2Y7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
Mrpl47Q8K2Y7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Mrpl47Q8K2Y7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl47Q8K2Y7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl47Q8K2Y7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Mrpl47Q8K2Y7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl47Q8K2Y7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl47Q8K2Y7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.62■□□□□ 0.57
Mrpl47Q8K2Y7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.62■□□□□ 0.57
Mrpl47Q8K2Y7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl47Q8K2Y7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl47Q8K2Y7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Mrpl47Q8K2Y7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl47Q8K2Y7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Mrpl47Q8K2Y7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl47Q8K2Y7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl47Q8K2Y7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl47Q8K2Y7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl47Q8K2Y7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl47Q8K2Y7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl47Q8K2Y7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Mrpl47Q8K2Y7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mrpl47Q8K2Y7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
Mrpl47Q8K2Y7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mrpl47Q8K2Y7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mrpl47Q8K2Y7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mrpl47Q8K2Y7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Mrpl47Q8K2Y7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mrpl47Q8K2Y7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mrpl47Q8K2Y7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
Mrpl47Q8K2Y7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mrpl47Q8K2Y7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Mrpl47Q8K2Y7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mrpl47Q8K2Y7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl47Q8K2Y7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl47Q8K2Y7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl47Q8K2Y7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl47Q8K2Y7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl47Q8K2Y7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Mrpl47Q8K2Y7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.6■□□□□ 0.57
Mrpl47Q8K2Y7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Mrpl47Q8K2Y7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl47Q8K2Y7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Mrpl47Q8K2Y7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl47Q8K2Y7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Mrpl47Q8K2Y7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl47Q8K2Y7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Mrpl47Q8K2Y7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl47Q8K2Y7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mrpl47Q8K2Y7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl47Q8K2Y7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl47Q8K2Y7 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.59■□□□□ 0.57
Mrpl47Q8K2Y7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Mrpl47Q8K2Y7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl47Q8K2Y7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl47Q8K2Y7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mrpl47Q8K2Y7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms