Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.33■□□□□ 0.52
Rdh1Q8CGV4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rdh1Q8CGV4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rdh1Q8CGV4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rdh1Q8CGV4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.33■□□□□ 0.52
Rdh1Q8CGV4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rdh1Q8CGV4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rdh1Q8CGV4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rdh1Q8CGV4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.33■□□□□ 0.52
Rdh1Q8CGV4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rdh1Q8CGV4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rdh1Q8CGV4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rdh1Q8CGV4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rdh1Q8CGV4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.32■□□□□ 0.52
Rdh1Q8CGV4 Gm26524-201ENSMUST00000192339 390 ntBASIC18.32■□□□□ 0.52
Rdh1Q8CGV4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rdh1Q8CGV4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rdh1Q8CGV4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rdh1Q8CGV4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rdh1Q8CGV4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rdh1Q8CGV4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rdh1Q8CGV4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rdh1Q8CGV4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rdh1Q8CGV4 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.31■□□□□ 0.52
Rdh1Q8CGV4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rdh1Q8CGV4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rdh1Q8CGV4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rdh1Q8CGV4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rdh1Q8CGV4 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.31■□□□□ 0.52
Rdh1Q8CGV4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rdh1Q8CGV4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rdh1Q8CGV4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rdh1Q8CGV4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rdh1Q8CGV4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rdh1Q8CGV4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rdh1Q8CGV4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rdh1Q8CGV4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.3■□□□□ 0.52
Rdh1Q8CGV4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rdh1Q8CGV4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rdh1Q8CGV4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rdh1Q8CGV4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rdh1Q8CGV4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rdh1Q8CGV4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rdh1Q8CGV4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rdh1Q8CGV4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rdh1Q8CGV4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rdh1Q8CGV4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.3■□□□□ 0.52
Rdh1Q8CGV4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rdh1Q8CGV4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rdh1Q8CGV4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rdh1Q8CGV4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rdh1Q8CGV4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rdh1Q8CGV4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Rdh1Q8CGV4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rdh1Q8CGV4 Golph3-202ENSMUST00000226517 2359 ntBASIC18.29■□□□□ 0.52
Rdh1Q8CGV4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rdh1Q8CGV4 Gm10653-202ENSMUST00000139570 835 ntBASIC18.29■□□□□ 0.52
Rdh1Q8CGV4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rdh1Q8CGV4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rdh1Q8CGV4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Rdh1Q8CGV4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rdh1Q8CGV4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rdh1Q8CGV4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rdh1Q8CGV4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rdh1Q8CGV4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rdh1Q8CGV4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rdh1Q8CGV4 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.28■□□□□ 0.52
Rdh1Q8CGV4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rdh1Q8CGV4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Rdh1Q8CGV4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rdh1Q8CGV4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rdh1Q8CGV4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rdh1Q8CGV4 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.28■□□□□ 0.52
Rdh1Q8CGV4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.28■□□□□ 0.52
Rdh1Q8CGV4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rdh1Q8CGV4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rdh1Q8CGV4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Rdh1Q8CGV4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rdh1Q8CGV4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rdh1Q8CGV4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rdh1Q8CGV4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rdh1Q8CGV4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rdh1Q8CGV4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rdh1Q8CGV4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rdh1Q8CGV4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rdh1Q8CGV4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rdh1Q8CGV4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rdh1Q8CGV4 Gm12527-201ENSMUST00000117967 564 ntBASIC18.27■□□□□ 0.52
Rdh1Q8CGV4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rdh1Q8CGV4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.27■□□□□ 0.52
Rdh1Q8CGV4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.27■□□□□ 0.52
Rdh1Q8CGV4 Rab3c-203ENSMUST00000224180 967 ntBASIC18.27■□□□□ 0.52
Rdh1Q8CGV4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rdh1Q8CGV4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rdh1Q8CGV4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rdh1Q8CGV4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rdh1Q8CGV4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rdh1Q8CGV4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rdh1Q8CGV4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rdh1Q8CGV4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms