Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShfQ8CG80 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.79■□□□□ 0.28
ShfQ8CG80 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShfQ8CG80 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShfQ8CG80 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
ShfQ8CG80 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShfQ8CG80 Gm27801-201ENSMUST00000184174 223 ntBASIC16.79■□□□□ 0.28
ShfQ8CG80 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShfQ8CG80 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShfQ8CG80 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShfQ8CG80 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShfQ8CG80 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShfQ8CG80 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ShfQ8CG80 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ShfQ8CG80 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ShfQ8CG80 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ShfQ8CG80 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ShfQ8CG80 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.78■□□□□ 0.28
ShfQ8CG80 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.78■□□□□ 0.28
ShfQ8CG80 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.78■□□□□ 0.28
ShfQ8CG80 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ShfQ8CG80 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
ShfQ8CG80 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ShfQ8CG80 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ShfQ8CG80 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ShfQ8CG80 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ShfQ8CG80 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ShfQ8CG80 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ShfQ8CG80 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
ShfQ8CG80 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ShfQ8CG80 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
ShfQ8CG80 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ShfQ8CG80 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ShfQ8CG80 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ShfQ8CG80 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ShfQ8CG80 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ShfQ8CG80 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShfQ8CG80 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShfQ8CG80 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ShfQ8CG80 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShfQ8CG80 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShfQ8CG80 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShfQ8CG80 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShfQ8CG80 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShfQ8CG80 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.76■□□□□ 0.27
ShfQ8CG80 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShfQ8CG80 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShfQ8CG80 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.76■□□□□ 0.27
ShfQ8CG80 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShfQ8CG80 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ShfQ8CG80 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ShfQ8CG80 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ShfQ8CG80 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ShfQ8CG80 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShfQ8CG80 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ShfQ8CG80 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ShfQ8CG80 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ShfQ8CG80 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
ShfQ8CG80 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ShfQ8CG80 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ShfQ8CG80 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
ShfQ8CG80 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ShfQ8CG80 Gm13241-201ENSMUST00000094493 780 ntBASIC16.75■□□□□ 0.27
ShfQ8CG80 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShfQ8CG80 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.75■□□□□ 0.27
ShfQ8CG80 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.75■□□□□ 0.27
ShfQ8CG80 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShfQ8CG80 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShfQ8CG80 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ShfQ8CG80 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShfQ8CG80 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.74■□□□□ 0.27
ShfQ8CG80 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.74■□□□□ 0.27
ShfQ8CG80 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ShfQ8CG80 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.74■□□□□ 0.27
ShfQ8CG80 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.74■□□□□ 0.27
ShfQ8CG80 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShfQ8CG80 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ShfQ8CG80 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ShfQ8CG80 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
ShfQ8CG80 Gm43173-201ENSMUST00000202246 593 ntBASIC16.74■□□□□ 0.27
ShfQ8CG80 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.74■□□□□ 0.27
ShfQ8CG80 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShfQ8CG80 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShfQ8CG80 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShfQ8CG80 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShfQ8CG80 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ShfQ8CG80 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.74■□□□□ 0.27
ShfQ8CG80 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.74■□□□□ 0.27
ShfQ8CG80 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ShfQ8CG80 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ShfQ8CG80 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ShfQ8CG80 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.73■□□□□ 0.27
ShfQ8CG80 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ShfQ8CG80 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
ShfQ8CG80 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ShfQ8CG80 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ShfQ8CG80 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ShfQ8CG80 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ShfQ8CG80 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.73■□□□□ 0.27
ShfQ8CG80 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms