Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Smc5Q8CG46 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC23.36■■□□□ 1.33
Smc5Q8CG46 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC23.36■■□□□ 1.33
Smc5Q8CG46 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Smc5Q8CG46 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Smc5Q8CG46 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smc5Q8CG46 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smc5Q8CG46 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Smc5Q8CG46 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Smc5Q8CG46 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Smc5Q8CG46 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smc5Q8CG46 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Smc5Q8CG46 Gm21956-201ENSMUST00000179946 522 ntBASIC23.35■■□□□ 1.33
Smc5Q8CG46 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smc5Q8CG46 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.35■■□□□ 1.33
Smc5Q8CG46 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smc5Q8CG46 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smc5Q8CG46 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smc5Q8CG46 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smc5Q8CG46 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC23.35■■□□□ 1.33
Smc5Q8CG46 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smc5Q8CG46 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Smc5Q8CG46 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Smc5Q8CG46 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smc5Q8CG46 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smc5Q8CG46 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Smc5Q8CG46 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Smc5Q8CG46 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smc5Q8CG46 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smc5Q8CG46 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smc5Q8CG46 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smc5Q8CG46 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Smc5Q8CG46 Gm42922-201ENSMUST00000195887 2078 ntBASIC23.34■■□□□ 1.33
Smc5Q8CG46 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smc5Q8CG46 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smc5Q8CG46 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Smc5Q8CG46 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smc5Q8CG46 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smc5Q8CG46 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Smc5Q8CG46 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smc5Q8CG46 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Smc5Q8CG46 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.33■■□□□ 1.33
Smc5Q8CG46 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smc5Q8CG46 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Smc5Q8CG46 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Smc5Q8CG46 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Smc5Q8CG46 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smc5Q8CG46 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Smc5Q8CG46 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC23.32■■□□□ 1.32
Smc5Q8CG46 AC137127.1-201ENSMUST00000213466 1078 ntBASIC23.32■■□□□ 1.32
Smc5Q8CG46 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smc5Q8CG46 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smc5Q8CG46 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Smc5Q8CG46 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smc5Q8CG46 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smc5Q8CG46 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Smc5Q8CG46 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smc5Q8CG46 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smc5Q8CG46 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smc5Q8CG46 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smc5Q8CG46 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smc5Q8CG46 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
Smc5Q8CG46 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smc5Q8CG46 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smc5Q8CG46 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smc5Q8CG46 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Smc5Q8CG46 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smc5Q8CG46 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smc5Q8CG46 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smc5Q8CG46 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Smc5Q8CG46 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smc5Q8CG46 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smc5Q8CG46 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc5Q8CG46 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc5Q8CG46 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc5Q8CG46 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc5Q8CG46 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc5Q8CG46 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Smc5Q8CG46 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc5Q8CG46 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc5Q8CG46 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC23.29■■□□□ 1.32
Smc5Q8CG46 Gm43173-201ENSMUST00000202246 593 ntBASIC23.29■■□□□ 1.32
Smc5Q8CG46 Gm45906-201ENSMUST00000208911 1430 ntBASIC23.29■■□□□ 1.32
Smc5Q8CG46 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC23.29■■□□□ 1.32
Smc5Q8CG46 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.29■■□□□ 1.32
Smc5Q8CG46 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc5Q8CG46 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc5Q8CG46 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Smc5Q8CG46 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smc5Q8CG46 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smc5Q8CG46 Gm11421-201ENSMUST00000122124 294 ntBASIC23.28■■□□□ 1.32
Smc5Q8CG46 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smc5Q8CG46 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smc5Q8CG46 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC23.28■■□□□ 1.32
Smc5Q8CG46 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Smc5Q8CG46 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smc5Q8CG46 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Smc5Q8CG46 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smc5Q8CG46 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smc5Q8CG46 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms