Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Polr2bQ8CFI7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Polr2bQ8CFI7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.17■□□□□ 0.82
Polr2bQ8CFI7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Polr2bQ8CFI7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Polr2bQ8CFI7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Polr2bQ8CFI7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Polr2bQ8CFI7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Polr2bQ8CFI7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Polr2bQ8CFI7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Polr2bQ8CFI7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Polr2bQ8CFI7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Polr2bQ8CFI7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Polr2bQ8CFI7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Polr2bQ8CFI7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Polr2bQ8CFI7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Polr2bQ8CFI7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Polr2bQ8CFI7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Polr2bQ8CFI7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Polr2bQ8CFI7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.16■□□□□ 0.82
Polr2bQ8CFI7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Polr2bQ8CFI7 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.16■□□□□ 0.82
Polr2bQ8CFI7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Polr2bQ8CFI7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Polr2bQ8CFI7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Polr2bQ8CFI7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Polr2bQ8CFI7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.16■□□□□ 0.82
Polr2bQ8CFI7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Polr2bQ8CFI7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Polr2bQ8CFI7 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.15■□□□□ 0.82
Polr2bQ8CFI7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Polr2bQ8CFI7 Gm29257-201ENSMUST00000186115 639 ntBASIC20.15■□□□□ 0.82
Polr2bQ8CFI7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.15■□□□□ 0.82
Polr2bQ8CFI7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Polr2bQ8CFI7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Polr2bQ8CFI7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Polr2bQ8CFI7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Polr2bQ8CFI7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Polr2bQ8CFI7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Polr2bQ8CFI7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.14■□□□□ 0.81
Polr2bQ8CFI7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.14■□□□□ 0.81
Polr2bQ8CFI7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Polr2bQ8CFI7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Polr2bQ8CFI7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Polr2bQ8CFI7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Polr2bQ8CFI7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Polr2bQ8CFI7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Polr2bQ8CFI7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Polr2bQ8CFI7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Polr2bQ8CFI7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Polr2bQ8CFI7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Polr2bQ8CFI7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.13■□□□□ 0.81
Polr2bQ8CFI7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Polr2bQ8CFI7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Polr2bQ8CFI7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Polr2bQ8CFI7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Polr2bQ8CFI7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Polr2bQ8CFI7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Polr2bQ8CFI7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Polr2bQ8CFI7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Polr2bQ8CFI7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Polr2bQ8CFI7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Polr2bQ8CFI7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Polr2bQ8CFI7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Polr2bQ8CFI7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Polr2bQ8CFI7 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.12■□□□□ 0.81
Polr2bQ8CFI7 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.12■□□□□ 0.81
Polr2bQ8CFI7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.12■□□□□ 0.81
Polr2bQ8CFI7 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.12■□□□□ 0.81
Polr2bQ8CFI7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Polr2bQ8CFI7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Polr2bQ8CFI7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Polr2bQ8CFI7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Polr2bQ8CFI7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Polr2bQ8CFI7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Polr2bQ8CFI7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Polr2bQ8CFI7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
Polr2bQ8CFI7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Polr2bQ8CFI7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Polr2bQ8CFI7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Polr2bQ8CFI7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.11■□□□□ 0.81
Polr2bQ8CFI7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Polr2bQ8CFI7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Polr2bQ8CFI7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Polr2bQ8CFI7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Polr2bQ8CFI7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Polr2bQ8CFI7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.11■□□□□ 0.81
Polr2bQ8CFI7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Polr2bQ8CFI7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Polr2bQ8CFI7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Polr2bQ8CFI7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Polr2bQ8CFI7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.1■□□□□ 0.81
Polr2bQ8CFI7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Polr2bQ8CFI7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
Polr2bQ8CFI7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Polr2bQ8CFI7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.1■□□□□ 0.81
Polr2bQ8CFI7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Polr2bQ8CFI7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Polr2bQ8CFI7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Polr2bQ8CFI7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms