Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf31Q8CCF0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf31Q8CCF0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf31Q8CCF0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.59■□□□□ 0.89
Prpf31Q8CCF0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf31Q8CCF0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf31Q8CCF0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Prpf31Q8CCF0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.59■□□□□ 0.89
Prpf31Q8CCF0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.59■□□□□ 0.89
Prpf31Q8CCF0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
Prpf31Q8CCF0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf31Q8CCF0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf31Q8CCF0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf31Q8CCF0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf31Q8CCF0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf31Q8CCF0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Prpf31Q8CCF0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf31Q8CCF0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Prpf31Q8CCF0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf31Q8CCF0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Prpf31Q8CCF0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf31Q8CCF0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf31Q8CCF0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf31Q8CCF0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Prpf31Q8CCF0 Gm6211-202ENSMUST00000167849 925 ntBASIC20.58■□□□□ 0.89
Prpf31Q8CCF0 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.58■□□□□ 0.89
Prpf31Q8CCF0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf31Q8CCF0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf31Q8CCF0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf31Q8CCF0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.57■□□□□ 0.88
Prpf31Q8CCF0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf31Q8CCF0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf31Q8CCF0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Prpf31Q8CCF0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf31Q8CCF0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Prpf31Q8CCF0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Prpf31Q8CCF0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf31Q8CCF0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Prpf31Q8CCF0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf31Q8CCF0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf31Q8CCF0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf31Q8CCF0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.56■□□□□ 0.88
Prpf31Q8CCF0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf31Q8CCF0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Prpf31Q8CCF0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.56■□□□□ 0.88
Prpf31Q8CCF0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf31Q8CCF0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf31Q8CCF0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.56■□□□□ 0.88
Prpf31Q8CCF0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf31Q8CCF0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf31Q8CCF0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf31Q8CCF0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf31Q8CCF0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf31Q8CCF0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf31Q8CCF0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf31Q8CCF0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Prpf31Q8CCF0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.55■□□□□ 0.88
Prpf31Q8CCF0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf31Q8CCF0 Gm4968-201ENSMUST00000071458 858 ntBASIC20.55■□□□□ 0.88
Prpf31Q8CCF0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf31Q8CCF0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf31Q8CCF0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf31Q8CCF0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf31Q8CCF0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf31Q8CCF0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf31Q8CCF0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Prpf31Q8CCF0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Prpf31Q8CCF0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf31Q8CCF0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Prpf31Q8CCF0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf31Q8CCF0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.54■□□□□ 0.88
Prpf31Q8CCF0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Prpf31Q8CCF0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf31Q8CCF0 Golph3-202ENSMUST00000226517 2359 ntBASIC20.54■□□□□ 0.88
Prpf31Q8CCF0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf31Q8CCF0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf31Q8CCF0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf31Q8CCF0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Prpf31Q8CCF0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf31Q8CCF0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf31Q8CCF0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf31Q8CCF0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf31Q8CCF0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Prpf31Q8CCF0 Gm12441-201ENSMUST00000121806 588 ntBASIC20.53■□□□□ 0.88
Prpf31Q8CCF0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Prpf31Q8CCF0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.53■□□□□ 0.88
Prpf31Q8CCF0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf31Q8CCF0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf31Q8CCF0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf31Q8CCF0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf31Q8CCF0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf31Q8CCF0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Prpf31Q8CCF0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf31Q8CCF0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Prpf31Q8CCF0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf31Q8CCF0 Gm5408-201ENSMUST00000197998 747 ntBASIC20.52■□□□□ 0.88
Prpf31Q8CCF0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf31Q8CCF0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf31Q8CCF0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf31Q8CCF0 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.52■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms