Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Uba3Q8C878 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Uba3Q8C878 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Uba3Q8C878 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Uba3Q8C878 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Uba3Q8C878 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Uba3Q8C878 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Uba3Q8C878 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Uba3Q8C878 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Uba3Q8C878 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Uba3Q8C878 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Uba3Q8C878 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Uba3Q8C878 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Uba3Q8C878 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Uba3Q8C878 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Uba3Q8C878 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Uba3Q8C878 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Uba3Q8C878 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Uba3Q8C878 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Uba3Q8C878 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Uba3Q8C878 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Uba3Q8C878 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Uba3Q8C878 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Uba3Q8C878 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Uba3Q8C878 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Uba3Q8C878 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Uba3Q8C878 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Uba3Q8C878 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Uba3Q8C878 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Uba3Q8C878 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Uba3Q8C878 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Uba3Q8C878 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.78■□□□□ 0.76
Uba3Q8C878 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Uba3Q8C878 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Uba3Q8C878 Gm6420-201ENSMUST00000193885 723 ntBASIC19.78■□□□□ 0.76
Uba3Q8C878 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Uba3Q8C878 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Uba3Q8C878 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Uba3Q8C878 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Uba3Q8C878 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Uba3Q8C878 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Uba3Q8C878 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Uba3Q8C878 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Uba3Q8C878 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Uba3Q8C878 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Uba3Q8C878 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Uba3Q8C878 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Uba3Q8C878 Gm27405-201ENSMUST00000184201 112 ntBASIC19.77■□□□□ 0.76
Uba3Q8C878 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.77■□□□□ 0.76
Uba3Q8C878 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Uba3Q8C878 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Uba3Q8C878 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Uba3Q8C878 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.77■□□□□ 0.76
Uba3Q8C878 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Uba3Q8C878 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.76■□□□□ 0.75
Uba3Q8C878 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Uba3Q8C878 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.76■□□□□ 0.75
Uba3Q8C878 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Uba3Q8C878 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Uba3Q8C878 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Uba3Q8C878 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Uba3Q8C878 Nespas-201ENSMUST00000143738 1083 ntBASIC19.76■□□□□ 0.75
Uba3Q8C878 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.76■□□□□ 0.75
Uba3Q8C878 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Uba3Q8C878 Gm7291-201ENSMUST00000199147 382 ntBASIC19.76■□□□□ 0.75
Uba3Q8C878 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.76■□□□□ 0.75
Uba3Q8C878 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Uba3Q8C878 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Uba3Q8C878 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Uba3Q8C878 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Uba3Q8C878 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Uba3Q8C878 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Uba3Q8C878 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Uba3Q8C878 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Uba3Q8C878 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Uba3Q8C878 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Uba3Q8C878 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Uba3Q8C878 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Uba3Q8C878 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Uba3Q8C878 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.75■□□□□ 0.75
Uba3Q8C878 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Uba3Q8C878 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Uba3Q8C878 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Uba3Q8C878 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Uba3Q8C878 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Uba3Q8C878 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Uba3Q8C878 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Uba3Q8C878 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Uba3Q8C878 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Uba3Q8C878 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Uba3Q8C878 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Uba3Q8C878 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.74■□□□□ 0.75
Uba3Q8C878 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Uba3Q8C878 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Uba3Q8C878 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.74■□□□□ 0.75
Uba3Q8C878 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Uba3Q8C878 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.74■□□□□ 0.75
Uba3Q8C878 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Uba3Q8C878 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Uba3Q8C878 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms