Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim9Q8C7M3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim9Q8C7M3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim9Q8C7M3 Gm13146-201ENSMUST00000118508 780 ntBASIC20.84■□□□□ 0.93
Trim9Q8C7M3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.84■□□□□ 0.93
Trim9Q8C7M3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim9Q8C7M3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim9Q8C7M3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim9Q8C7M3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim9Q8C7M3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim9Q8C7M3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim9Q8C7M3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim9Q8C7M3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim9Q8C7M3 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.83■□□□□ 0.93
Trim9Q8C7M3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim9Q8C7M3 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.83■□□□□ 0.93
Trim9Q8C7M3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim9Q8C7M3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim9Q8C7M3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.83■□□□□ 0.93
Trim9Q8C7M3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim9Q8C7M3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.83■□□□□ 0.93
Trim9Q8C7M3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.83■□□□□ 0.93
Trim9Q8C7M3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim9Q8C7M3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trim9Q8C7M3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim9Q8C7M3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim9Q8C7M3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim9Q8C7M3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim9Q8C7M3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim9Q8C7M3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim9Q8C7M3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim9Q8C7M3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim9Q8C7M3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim9Q8C7M3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.81■□□□□ 0.92
Trim9Q8C7M3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim9Q8C7M3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim9Q8C7M3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Trim9Q8C7M3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim9Q8C7M3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim9Q8C7M3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.81■□□□□ 0.92
Trim9Q8C7M3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim9Q8C7M3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim9Q8C7M3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim9Q8C7M3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim9Q8C7M3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Trim9Q8C7M3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim9Q8C7M3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim9Q8C7M3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim9Q8C7M3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.8■□□□□ 0.92
Trim9Q8C7M3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim9Q8C7M3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim9Q8C7M3 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.8■□□□□ 0.92
Trim9Q8C7M3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim9Q8C7M3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Trim9Q8C7M3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim9Q8C7M3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim9Q8C7M3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.79■□□□□ 0.92
Trim9Q8C7M3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim9Q8C7M3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim9Q8C7M3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.79■□□□□ 0.92
Trim9Q8C7M3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim9Q8C7M3 Gm10493-201ENSMUST00000097270 612 ntBASIC20.79■□□□□ 0.92
Trim9Q8C7M3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.79■□□□□ 0.92
Trim9Q8C7M3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim9Q8C7M3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim9Q8C7M3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim9Q8C7M3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim9Q8C7M3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim9Q8C7M3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Trim9Q8C7M3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim9Q8C7M3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim9Q8C7M3 Gm13234-201ENSMUST00000120010 747 ntBASIC20.78■□□□□ 0.92
Trim9Q8C7M3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim9Q8C7M3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim9Q8C7M3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim9Q8C7M3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim9Q8C7M3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim9Q8C7M3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Trim9Q8C7M3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.77■□□□□ 0.92
Trim9Q8C7M3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim9Q8C7M3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim9Q8C7M3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.77■□□□□ 0.91
Trim9Q8C7M3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Trim9Q8C7M3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim9Q8C7M3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim9Q8C7M3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim9Q8C7M3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim9Q8C7M3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim9Q8C7M3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim9Q8C7M3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim9Q8C7M3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.75■□□□□ 0.91
Trim9Q8C7M3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim9Q8C7M3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim9Q8C7M3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim9Q8C7M3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim9Q8C7M3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim9Q8C7M3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.75■□□□□ 0.91
Trim9Q8C7M3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim9Q8C7M3 Gm13534-201ENSMUST00000121169 513 ntBASIC20.75■□□□□ 0.91
Trim9Q8C7M3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms