Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp20Q8C6M1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp20Q8C6M1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp20Q8C6M1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp20Q8C6M1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp20Q8C6M1 Gm13168-201ENSMUST00000121771 632 ntBASIC20.81■□□□□ 0.92
Usp20Q8C6M1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.81■□□□□ 0.92
Usp20Q8C6M1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.81■□□□□ 0.92
Usp20Q8C6M1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Usp20Q8C6M1 Gm8520-201ENSMUST00000186517 868 ntBASIC20.81■□□□□ 0.92
Usp20Q8C6M1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp20Q8C6M1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp20Q8C6M1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp20Q8C6M1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Usp20Q8C6M1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp20Q8C6M1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp20Q8C6M1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp20Q8C6M1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Usp20Q8C6M1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp20Q8C6M1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp20Q8C6M1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp20Q8C6M1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp20Q8C6M1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp20Q8C6M1 Gm26524-201ENSMUST00000192339 390 ntBASIC20.8■□□□□ 0.92
Usp20Q8C6M1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Usp20Q8C6M1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp20Q8C6M1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp20Q8C6M1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Usp20Q8C6M1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp20Q8C6M1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp20Q8C6M1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp20Q8C6M1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp20Q8C6M1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp20Q8C6M1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Usp20Q8C6M1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp20Q8C6M1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp20Q8C6M1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp20Q8C6M1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Usp20Q8C6M1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp20Q8C6M1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp20Q8C6M1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp20Q8C6M1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp20Q8C6M1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Usp20Q8C6M1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp20Q8C6M1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.78■□□□□ 0.92
Usp20Q8C6M1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Usp20Q8C6M1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Usp20Q8C6M1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp20Q8C6M1 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.78■□□□□ 0.92
Usp20Q8C6M1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp20Q8C6M1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp20Q8C6M1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp20Q8C6M1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp20Q8C6M1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp20Q8C6M1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp20Q8C6M1 Rab3c-203ENSMUST00000224180 967 ntBASIC20.77■□□□□ 0.92
Usp20Q8C6M1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp20Q8C6M1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp20Q8C6M1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.77■□□□□ 0.91
Usp20Q8C6M1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Usp20Q8C6M1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp20Q8C6M1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp20Q8C6M1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp20Q8C6M1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp20Q8C6M1 Gm10252-201ENSMUST00000209541 832 ntBASIC20.76■□□□□ 0.91
Usp20Q8C6M1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Usp20Q8C6M1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp20Q8C6M1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp20Q8C6M1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Usp20Q8C6M1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp20Q8C6M1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Usp20Q8C6M1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp20Q8C6M1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp20Q8C6M1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.75■□□□□ 0.91
Usp20Q8C6M1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp20Q8C6M1 Trmt13-210ENSMUST00000198454 880 ntBASIC20.75■□□□□ 0.91
Usp20Q8C6M1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.75■□□□□ 0.91
Usp20Q8C6M1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp20Q8C6M1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp20Q8C6M1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp20Q8C6M1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp20Q8C6M1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp20Q8C6M1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp20Q8C6M1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp20Q8C6M1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.74■□□□□ 0.91
Usp20Q8C6M1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp20Q8C6M1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
Usp20Q8C6M1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Usp20Q8C6M1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp20Q8C6M1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp20Q8C6M1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp20Q8C6M1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.73■□□□□ 0.91
Usp20Q8C6M1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp20Q8C6M1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Usp20Q8C6M1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.73■□□□□ 0.91
Usp20Q8C6M1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp20Q8C6M1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp20Q8C6M1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp20Q8C6M1 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.73■□□□□ 0.91
Usp20Q8C6M1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms