Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col6a6Q8C6K9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.02■□□□□ 0.32
Col6a6Q8C6K9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Col6a6Q8C6K9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Col6a6Q8C6K9 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.02■□□□□ 0.32
Col6a6Q8C6K9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col6a6Q8C6K9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.02■□□□□ 0.32
Col6a6Q8C6K9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col6a6Q8C6K9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col6a6Q8C6K9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a6Q8C6K9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.01■□□□□ 0.31
Col6a6Q8C6K9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.01■□□□□ 0.31
Col6a6Q8C6K9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a6Q8C6K9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.01■□□□□ 0.31
Col6a6Q8C6K9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a6Q8C6K9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a6Q8C6K9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.01■□□□□ 0.31
Col6a6Q8C6K9 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.01■□□□□ 0.31
Col6a6Q8C6K9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a6Q8C6K9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a6Q8C6K9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a6Q8C6K9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a6Q8C6K9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.01■□□□□ 0.31
Col6a6Q8C6K9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a6Q8C6K9 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.01■□□□□ 0.31
Col6a6Q8C6K9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col6a6Q8C6K9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a6Q8C6K9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a6Q8C6K9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Col6a6Q8C6K9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Col6a6Q8C6K9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17■□□□□ 0.31
Col6a6Q8C6K9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a6Q8C6K9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Col6a6Q8C6K9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a6Q8C6K9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a6Q8C6K9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a6Q8C6K9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a6Q8C6K9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a6Q8C6K9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Col6a6Q8C6K9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col6a6Q8C6K9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a6Q8C6K9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col6a6Q8C6K9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col6a6Q8C6K9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a6Q8C6K9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.99■□□□□ 0.31
Col6a6Q8C6K9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a6Q8C6K9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.99■□□□□ 0.31
Col6a6Q8C6K9 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.99■□□□□ 0.31
Col6a6Q8C6K9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a6Q8C6K9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Col6a6Q8C6K9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Col6a6Q8C6K9 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.99■□□□□ 0.31
Col6a6Q8C6K9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.99■□□□□ 0.31
Col6a6Q8C6K9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col6a6Q8C6K9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a6Q8C6K9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a6Q8C6K9 Gm18666-201ENSMUST00000190039 958 ntBASIC16.98■□□□□ 0.31
Col6a6Q8C6K9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a6Q8C6K9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.98■□□□□ 0.31
Col6a6Q8C6K9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a6Q8C6K9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a6Q8C6K9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a6Q8C6K9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a6Q8C6K9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a6Q8C6K9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a6Q8C6K9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a6Q8C6K9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Col6a6Q8C6K9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.98■□□□□ 0.31
Col6a6Q8C6K9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a6Q8C6K9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a6Q8C6K9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a6Q8C6K9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a6Q8C6K9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a6Q8C6K9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a6Q8C6K9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a6Q8C6K9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Col6a6Q8C6K9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a6Q8C6K9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a6Q8C6K9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Col6a6Q8C6K9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.96■□□□□ 0.31
Col6a6Q8C6K9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.96■□□□□ 0.31
Col6a6Q8C6K9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a6Q8C6K9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
Col6a6Q8C6K9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a6Q8C6K9 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.96■□□□□ 0.31
Col6a6Q8C6K9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.96■□□□□ 0.31
Col6a6Q8C6K9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a6Q8C6K9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a6Q8C6K9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a6Q8C6K9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a6Q8C6K9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a6Q8C6K9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a6Q8C6K9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a6Q8C6K9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a6Q8C6K9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a6Q8C6K9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.96■□□□□ 0.31
Col6a6Q8C6K9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col6a6Q8C6K9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col6a6Q8C6K9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a6Q8C6K9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms