Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.84■□□□□ 0.77
Brat1Q8C3R1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.84■□□□□ 0.77
Brat1Q8C3R1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Brat1Q8C3R1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brat1Q8C3R1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brat1Q8C3R1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brat1Q8C3R1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Brat1Q8C3R1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brat1Q8C3R1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Brat1Q8C3R1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brat1Q8C3R1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Brat1Q8C3R1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Brat1Q8C3R1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Brat1Q8C3R1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.83■□□□□ 0.77
Brat1Q8C3R1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Brat1Q8C3R1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Brat1Q8C3R1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.83■□□□□ 0.77
Brat1Q8C3R1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.83■□□□□ 0.77
Brat1Q8C3R1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Brat1Q8C3R1 Gm6365-201ENSMUST00000054711 744 ntBASIC19.83■□□□□ 0.77
Brat1Q8C3R1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Brat1Q8C3R1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Brat1Q8C3R1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Brat1Q8C3R1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Brat1Q8C3R1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
Brat1Q8C3R1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Brat1Q8C3R1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Brat1Q8C3R1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.82■□□□□ 0.76
Brat1Q8C3R1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Brat1Q8C3R1 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.82■□□□□ 0.76
Brat1Q8C3R1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brat1Q8C3R1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brat1Q8C3R1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brat1Q8C3R1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brat1Q8C3R1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brat1Q8C3R1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brat1Q8C3R1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brat1Q8C3R1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brat1Q8C3R1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Brat1Q8C3R1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brat1Q8C3R1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brat1Q8C3R1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Brat1Q8C3R1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Brat1Q8C3R1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brat1Q8C3R1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brat1Q8C3R1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Brat1Q8C3R1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.81■□□□□ 0.76
Brat1Q8C3R1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brat1Q8C3R1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Brat1Q8C3R1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brat1Q8C3R1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brat1Q8C3R1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brat1Q8C3R1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brat1Q8C3R1 Gm7290-201ENSMUST00000104990 617 ntBASIC19.8■□□□□ 0.76
Brat1Q8C3R1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Brat1Q8C3R1 Gm12918-201ENSMUST00000120234 636 ntBASIC19.8■□□□□ 0.76
Brat1Q8C3R1 Gm15710-201ENSMUST00000121821 636 ntBASIC19.8■□□□□ 0.76
Brat1Q8C3R1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brat1Q8C3R1 Gm5075-201ENSMUST00000196916 622 ntBASIC19.8■□□□□ 0.76
Brat1Q8C3R1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brat1Q8C3R1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.8■□□□□ 0.76
Brat1Q8C3R1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.8■□□□□ 0.76
Brat1Q8C3R1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Brat1Q8C3R1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Brat1Q8C3R1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brat1Q8C3R1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brat1Q8C3R1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brat1Q8C3R1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brat1Q8C3R1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brat1Q8C3R1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Brat1Q8C3R1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.79■□□□□ 0.76
Brat1Q8C3R1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brat1Q8C3R1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Brat1Q8C3R1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brat1Q8C3R1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Brat1Q8C3R1 Mir5133-201ENSMUST00000174955 77 ntBASIC19.79■□□□□ 0.76
Brat1Q8C3R1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Brat1Q8C3R1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Brat1Q8C3R1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Brat1Q8C3R1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brat1Q8C3R1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brat1Q8C3R1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brat1Q8C3R1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Brat1Q8C3R1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brat1Q8C3R1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brat1Q8C3R1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brat1Q8C3R1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brat1Q8C3R1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brat1Q8C3R1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brat1Q8C3R1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Brat1Q8C3R1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brat1Q8C3R1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
Brat1Q8C3R1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brat1Q8C3R1 Gm10602-201ENSMUST00000098239 609 ntBASIC19.78■□□□□ 0.76
Brat1Q8C3R1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brat1Q8C3R1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Brat1Q8C3R1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brat1Q8C3R1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Brat1Q8C3R1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Brat1Q8C3R1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms