Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3rf2Q8BZT2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3rf2Q8BZT2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3rf2Q8BZT2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3rf2Q8BZT2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3rf2Q8BZT2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3rf2Q8BZT2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.12■□□□□ 0.65
Sh3rf2Q8BZT2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3rf2Q8BZT2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3rf2Q8BZT2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Sh3rf2Q8BZT2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Sh3rf2Q8BZT2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3rf2Q8BZT2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3rf2Q8BZT2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3rf2Q8BZT2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Sh3rf2Q8BZT2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3rf2Q8BZT2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3rf2Q8BZT2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3rf2Q8BZT2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3rf2Q8BZT2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Sh3rf2Q8BZT2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3rf2Q8BZT2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Sh3rf2Q8BZT2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3rf2Q8BZT2 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.09■□□□□ 0.65
Sh3rf2Q8BZT2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.09■□□□□ 0.65
Sh3rf2Q8BZT2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3rf2Q8BZT2 Gm22240-201ENSMUST00000175225 82 ntBASIC19.09■□□□□ 0.65
Sh3rf2Q8BZT2 Gm37856-201ENSMUST00000191634 999 ntBASIC19.09■□□□□ 0.65
Sh3rf2Q8BZT2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3rf2Q8BZT2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3rf2Q8BZT2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Sh3rf2Q8BZT2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3rf2Q8BZT2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3rf2Q8BZT2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3rf2Q8BZT2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3rf2Q8BZT2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3rf2Q8BZT2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3rf2Q8BZT2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3rf2Q8BZT2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3rf2Q8BZT2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3rf2Q8BZT2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3rf2Q8BZT2 Gm8520-201ENSMUST00000186517 868 ntBASIC19.08■□□□□ 0.64
Sh3rf2Q8BZT2 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.08■□□□□ 0.64
Sh3rf2Q8BZT2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Sh3rf2Q8BZT2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3rf2Q8BZT2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3rf2Q8BZT2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3rf2Q8BZT2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3rf2Q8BZT2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3rf2Q8BZT2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3rf2Q8BZT2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3rf2Q8BZT2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3rf2Q8BZT2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3rf2Q8BZT2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.07■□□□□ 0.64
Sh3rf2Q8BZT2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.07■□□□□ 0.64
Sh3rf2Q8BZT2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Sh3rf2Q8BZT2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3rf2Q8BZT2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Sh3rf2Q8BZT2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
Sh3rf2Q8BZT2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3rf2Q8BZT2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3rf2Q8BZT2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3rf2Q8BZT2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf2Q8BZT2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf2Q8BZT2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Sh3rf2Q8BZT2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf2Q8BZT2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Sh3rf2Q8BZT2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
Sh3rf2Q8BZT2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf2Q8BZT2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Sh3rf2Q8BZT2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf2Q8BZT2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf2Q8BZT2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf2Q8BZT2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf2Q8BZT2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf2Q8BZT2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3rf2Q8BZT2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3rf2Q8BZT2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3rf2Q8BZT2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Sh3rf2Q8BZT2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3rf2Q8BZT2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms