Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Usp43Q8BUM9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp43Q8BUM9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Usp43Q8BUM9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp43Q8BUM9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Usp43Q8BUM9 Gm13234-201ENSMUST00000120010 747 ntBASIC19.1■□□□□ 0.65
Usp43Q8BUM9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp43Q8BUM9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Usp43Q8BUM9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.1■□□□□ 0.65
Usp43Q8BUM9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Usp43Q8BUM9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp43Q8BUM9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp43Q8BUM9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp43Q8BUM9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Usp43Q8BUM9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp43Q8BUM9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.09■□□□□ 0.65
Usp43Q8BUM9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp43Q8BUM9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp43Q8BUM9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp43Q8BUM9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp43Q8BUM9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp43Q8BUM9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp43Q8BUM9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Usp43Q8BUM9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp43Q8BUM9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Usp43Q8BUM9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Usp43Q8BUM9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.08■□□□□ 0.65
Usp43Q8BUM9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp43Q8BUM9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp43Q8BUM9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp43Q8BUM9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp43Q8BUM9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.08■□□□□ 0.64
Usp43Q8BUM9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.08■□□□□ 0.64
Usp43Q8BUM9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp43Q8BUM9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp43Q8BUM9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.64
Usp43Q8BUM9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp43Q8BUM9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp43Q8BUM9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp43Q8BUM9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.07■□□□□ 0.64
Usp43Q8BUM9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp43Q8BUM9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp43Q8BUM9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp43Q8BUM9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp43Q8BUM9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp43Q8BUM9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp43Q8BUM9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Usp43Q8BUM9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
Usp43Q8BUM9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
Usp43Q8BUM9 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.07■□□□□ 0.64
Usp43Q8BUM9 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.07■□□□□ 0.64
Usp43Q8BUM9 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.07■□□□□ 0.64
Usp43Q8BUM9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.07■□□□□ 0.64
Usp43Q8BUM9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp43Q8BUM9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.07■□□□□ 0.64
Usp43Q8BUM9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp43Q8BUM9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Usp43Q8BUM9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp43Q8BUM9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp43Q8BUM9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp43Q8BUM9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp43Q8BUM9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Usp43Q8BUM9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp43Q8BUM9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp43Q8BUM9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp43Q8BUM9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Usp43Q8BUM9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp43Q8BUM9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp43Q8BUM9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp43Q8BUM9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp43Q8BUM9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp43Q8BUM9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.05■□□□□ 0.64
Usp43Q8BUM9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp43Q8BUM9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp43Q8BUM9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp43Q8BUM9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp43Q8BUM9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp43Q8BUM9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp43Q8BUM9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp43Q8BUM9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp43Q8BUM9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp43Q8BUM9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp43Q8BUM9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp43Q8BUM9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp43Q8BUM9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp43Q8BUM9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.05■□□□□ 0.64
Usp43Q8BUM9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp43Q8BUM9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp43Q8BUM9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp43Q8BUM9 Gm13534-201ENSMUST00000121169 513 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms