Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC25.06■■□□□ 1.6
Col16a1Q8BLX7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Col16a1Q8BLX7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Col16a1Q8BLX7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC25.05■■□□□ 1.6
Col16a1Q8BLX7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Col16a1Q8BLX7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Col16a1Q8BLX7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Col16a1Q8BLX7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Col16a1Q8BLX7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Col16a1Q8BLX7 Gm15847-201ENSMUST00000121417 1065 ntBASIC25.05■■□□□ 1.6
Col16a1Q8BLX7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC25.05■■□□□ 1.6
Col16a1Q8BLX7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Col16a1Q8BLX7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Col16a1Q8BLX7 Gm10231-201ENSMUST00000181584 441 ntBASIC25.05■■□□□ 1.6
Col16a1Q8BLX7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Col16a1Q8BLX7 Gm10175-202ENSMUST00000208752 441 ntBASIC25.05■■□□□ 1.6
Col16a1Q8BLX7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Col16a1Q8BLX7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Col16a1Q8BLX7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Col16a1Q8BLX7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
Col16a1Q8BLX7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Col16a1Q8BLX7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Col16a1Q8BLX7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Col16a1Q8BLX7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Col16a1Q8BLX7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Col16a1Q8BLX7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC25.03■■□□□ 1.6
Col16a1Q8BLX7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Col16a1Q8BLX7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC25.03■■□□□ 1.6
Col16a1Q8BLX7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Col16a1Q8BLX7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Col16a1Q8BLX7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Col16a1Q8BLX7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col16a1Q8BLX7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col16a1Q8BLX7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col16a1Q8BLX7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col16a1Q8BLX7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col16a1Q8BLX7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC25.02■■□□□ 1.6
Col16a1Q8BLX7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
Col16a1Q8BLX7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col16a1Q8BLX7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col16a1Q8BLX7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col16a1Q8BLX7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col16a1Q8BLX7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col16a1Q8BLX7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col16a1Q8BLX7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC25.02■■□□□ 1.6
Col16a1Q8BLX7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Col16a1Q8BLX7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC25.01■■□□□ 1.59
Col16a1Q8BLX7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Col16a1Q8BLX7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Col16a1Q8BLX7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Col16a1Q8BLX7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Col16a1Q8BLX7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Col16a1Q8BLX7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Col16a1Q8BLX7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC25■■□□□ 1.59
Col16a1Q8BLX7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Col16a1Q8BLX7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC25■■□□□ 1.59
Col16a1Q8BLX7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC25■■□□□ 1.59
Col16a1Q8BLX7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC25■■□□□ 1.59
Col16a1Q8BLX7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Col16a1Q8BLX7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Col16a1Q8BLX7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Col16a1Q8BLX7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC25■■□□□ 1.59
Col16a1Q8BLX7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Col16a1Q8BLX7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC25■■□□□ 1.59
Col16a1Q8BLX7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Col16a1Q8BLX7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Col16a1Q8BLX7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Col16a1Q8BLX7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Col16a1Q8BLX7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC24.99■■□□□ 1.59
Col16a1Q8BLX7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Col16a1Q8BLX7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Col16a1Q8BLX7 Gm43799-201ENSMUST00000201845 579 ntBASIC24.99■■□□□ 1.59
Col16a1Q8BLX7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
Col16a1Q8BLX7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Col16a1Q8BLX7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Col16a1Q8BLX7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Col16a1Q8BLX7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC24.98■■□□□ 1.59
Col16a1Q8BLX7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Col16a1Q8BLX7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
Col16a1Q8BLX7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Col16a1Q8BLX7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Col16a1Q8BLX7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Col16a1Q8BLX7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Col16a1Q8BLX7 Alkbh1-212ENSMUST00000185301 408 ntBASIC24.97■■□□□ 1.59
Col16a1Q8BLX7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Col16a1Q8BLX7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Col16a1Q8BLX7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Col16a1Q8BLX7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Col16a1Q8BLX7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
Col16a1Q8BLX7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Col16a1Q8BLX7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
Col16a1Q8BLX7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Col16a1Q8BLX7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Col16a1Q8BLX7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Col16a1Q8BLX7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Col16a1Q8BLX7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Col16a1Q8BLX7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Col16a1Q8BLX7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Col16a1Q8BLX7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
Col16a1Q8BLX7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms