Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2bQ8BJF9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2bQ8BJF9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Chmp2bQ8BJF9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Chmp2bQ8BJF9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2bQ8BJF9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2bQ8BJF9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2bQ8BJF9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.2■□□□□ 0.66
Chmp2bQ8BJF9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2bQ8BJF9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2bQ8BJF9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2bQ8BJF9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2bQ8BJF9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Chmp2bQ8BJF9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp2bQ8BJF9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2bQ8BJF9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2bQ8BJF9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2bQ8BJF9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Chmp2bQ8BJF9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2bQ8BJF9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.18■□□□□ 0.66
Chmp2bQ8BJF9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.18■□□□□ 0.66
Chmp2bQ8BJF9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2bQ8BJF9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.18■□□□□ 0.66
Chmp2bQ8BJF9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2bQ8BJF9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2bQ8BJF9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2bQ8BJF9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2bQ8BJF9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2bQ8BJF9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp2bQ8BJF9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Chmp2bQ8BJF9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Chmp2bQ8BJF9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2bQ8BJF9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2bQ8BJF9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2bQ8BJF9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2bQ8BJF9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Chmp2bQ8BJF9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2bQ8BJF9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.17■□□□□ 0.66
Chmp2bQ8BJF9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2bQ8BJF9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2bQ8BJF9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2bQ8BJF9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Chmp2bQ8BJF9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2bQ8BJF9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp2bQ8BJF9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp2bQ8BJF9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.16■□□□□ 0.66
Chmp2bQ8BJF9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp2bQ8BJF9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Chmp2bQ8BJF9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp2bQ8BJF9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp2bQ8BJF9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Chmp2bQ8BJF9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp2bQ8BJF9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp2bQ8BJF9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp2bQ8BJF9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.16■□□□□ 0.66
Chmp2bQ8BJF9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp2bQ8BJF9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp2bQ8BJF9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Chmp2bQ8BJF9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp2bQ8BJF9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp2bQ8BJF9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp2bQ8BJF9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp2bQ8BJF9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp2bQ8BJF9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp2bQ8BJF9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.15■□□□□ 0.66
Chmp2bQ8BJF9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp2bQ8BJF9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Chmp2bQ8BJF9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Chmp2bQ8BJF9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp2bQ8BJF9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp2bQ8BJF9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Chmp2bQ8BJF9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chmp2bQ8BJF9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chmp2bQ8BJF9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
Chmp2bQ8BJF9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Chmp2bQ8BJF9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2bQ8BJF9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.14■□□□□ 0.65
Chmp2bQ8BJF9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.14■□□□□ 0.65
Chmp2bQ8BJF9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2bQ8BJF9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms