Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim23Q8BGX0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim23Q8BGX0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Trim23Q8BGX0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim23Q8BGX0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim23Q8BGX0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim23Q8BGX0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim23Q8BGX0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim23Q8BGX0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim23Q8BGX0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trim23Q8BGX0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim23Q8BGX0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim23Q8BGX0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Trim23Q8BGX0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim23Q8BGX0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim23Q8BGX0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim23Q8BGX0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.14■□□□□ 0.49
Trim23Q8BGX0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim23Q8BGX0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trim23Q8BGX0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim23Q8BGX0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim23Q8BGX0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Gm7290-201ENSMUST00000104990 617 ntBASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Gm12918-201ENSMUST00000120234 636 ntBASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Gm15710-201ENSMUST00000121821 636 ntBASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Gm5075-201ENSMUST00000196916 622 ntBASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim23Q8BGX0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim23Q8BGX0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.12■□□□□ 0.49
Trim23Q8BGX0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim23Q8BGX0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim23Q8BGX0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim23Q8BGX0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim23Q8BGX0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim23Q8BGX0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim23Q8BGX0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim23Q8BGX0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim23Q8BGX0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.12■□□□□ 0.49
Trim23Q8BGX0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim23Q8BGX0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim23Q8BGX0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Trim23Q8BGX0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim23Q8BGX0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim23Q8BGX0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Trim23Q8BGX0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim23Q8BGX0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trim23Q8BGX0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim23Q8BGX0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim23Q8BGX0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trim23Q8BGX0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Trim23Q8BGX0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim23Q8BGX0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim23Q8BGX0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim23Q8BGX0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim23Q8BGX0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim23Q8BGX0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim23Q8BGX0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim23Q8BGX0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Trim23Q8BGX0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim23Q8BGX0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim23Q8BGX0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trim23Q8BGX0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim23Q8BGX0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trim23Q8BGX0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim23Q8BGX0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim23Q8BGX0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim23Q8BGX0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim23Q8BGX0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim23Q8BGX0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.1■□□□□ 0.49
Trim23Q8BGX0 Gm6365-201ENSMUST00000054711 744 ntBASIC18.1■□□□□ 0.49
Trim23Q8BGX0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim23Q8BGX0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim23Q8BGX0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trim23Q8BGX0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim23Q8BGX0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim23Q8BGX0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim23Q8BGX0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim23Q8BGX0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.09■□□□□ 0.49
Trim23Q8BGX0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim23Q8BGX0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.09■□□□□ 0.49
Trim23Q8BGX0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim23Q8BGX0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim23Q8BGX0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim23Q8BGX0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms