Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smndc1Q8BGT7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smndc1Q8BGT7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smndc1Q8BGT7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smndc1Q8BGT7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smndc1Q8BGT7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smndc1Q8BGT7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Smndc1Q8BGT7 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.17■□□□□ 0.5
Smndc1Q8BGT7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smndc1Q8BGT7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smndc1Q8BGT7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Smndc1Q8BGT7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smndc1Q8BGT7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.17■□□□□ 0.5
Smndc1Q8BGT7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.17■□□□□ 0.5
Smndc1Q8BGT7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smndc1Q8BGT7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smndc1Q8BGT7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smndc1Q8BGT7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.17■□□□□ 0.5
Smndc1Q8BGT7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Smndc1Q8BGT7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smndc1Q8BGT7 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smndc1Q8BGT7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smndc1Q8BGT7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Smndc1Q8BGT7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.16■□□□□ 0.5
Smndc1Q8BGT7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smndc1Q8BGT7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smndc1Q8BGT7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Smndc1Q8BGT7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smndc1Q8BGT7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smndc1Q8BGT7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smndc1Q8BGT7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Smndc1Q8BGT7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smndc1Q8BGT7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smndc1Q8BGT7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smndc1Q8BGT7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smndc1Q8BGT7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.15■□□□□ 0.5
Smndc1Q8BGT7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smndc1Q8BGT7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smndc1Q8BGT7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smndc1Q8BGT7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smndc1Q8BGT7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smndc1Q8BGT7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smndc1Q8BGT7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smndc1Q8BGT7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smndc1Q8BGT7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.15■□□□□ 0.5
Smndc1Q8BGT7 Gm9870-201ENSMUST00000063874 645 ntBASIC18.15■□□□□ 0.5
Smndc1Q8BGT7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Smndc1Q8BGT7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.15■□□□□ 0.5
Smndc1Q8BGT7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smndc1Q8BGT7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smndc1Q8BGT7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smndc1Q8BGT7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smndc1Q8BGT7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smndc1Q8BGT7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smndc1Q8BGT7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.14■□□□□ 0.49
Smndc1Q8BGT7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smndc1Q8BGT7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smndc1Q8BGT7 Gm12821-201ENSMUST00000120022 600 ntBASIC18.14■□□□□ 0.49
Smndc1Q8BGT7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smndc1Q8BGT7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smndc1Q8BGT7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Smndc1Q8BGT7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smndc1Q8BGT7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Smndc1Q8BGT7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smndc1Q8BGT7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Smndc1Q8BGT7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smndc1Q8BGT7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smndc1Q8BGT7 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.13■□□□□ 0.49
Smndc1Q8BGT7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Smndc1Q8BGT7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smndc1Q8BGT7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.13■□□□□ 0.49
Smndc1Q8BGT7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.13■□□□□ 0.49
Smndc1Q8BGT7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smndc1Q8BGT7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smndc1Q8BGT7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smndc1Q8BGT7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Smndc1Q8BGT7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.13■□□□□ 0.49
Smndc1Q8BGT7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smndc1Q8BGT7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smndc1Q8BGT7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smndc1Q8BGT7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smndc1Q8BGT7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.12■□□□□ 0.49
Smndc1Q8BGT7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smndc1Q8BGT7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smndc1Q8BGT7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smndc1Q8BGT7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Smndc1Q8BGT7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smndc1Q8BGT7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
Smndc1Q8BGT7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.12■□□□□ 0.49
Smndc1Q8BGT7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smndc1Q8BGT7 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.12■□□□□ 0.49
Smndc1Q8BGT7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smndc1Q8BGT7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Smndc1Q8BGT7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smndc1Q8BGT7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smndc1Q8BGT7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smndc1Q8BGT7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smndc1Q8BGT7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smndc1Q8BGT7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smndc1Q8BGT7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms