Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Skida1Q80YR3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Skida1Q80YR3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Skida1Q80YR3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Skida1Q80YR3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Skida1Q80YR3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Skida1Q80YR3 Gm42474-201ENSMUST00000201073 505 ntBASIC18.51■□□□□ 0.55
Skida1Q80YR3 Gm7514-201ENSMUST00000209475 934 ntBASIC18.51■□□□□ 0.55
Skida1Q80YR3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.51■□□□□ 0.55
Skida1Q80YR3 CT025525.2-201ENSMUST00000227743 423 ntBASIC18.51■□□□□ 0.55
Skida1Q80YR3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Skida1Q80YR3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Skida1Q80YR3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Skida1Q80YR3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Skida1Q80YR3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Skida1Q80YR3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Skida1Q80YR3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Skida1Q80YR3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Skida1Q80YR3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Skida1Q80YR3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Skida1Q80YR3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Skida1Q80YR3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Skida1Q80YR3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Skida1Q80YR3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Skida1Q80YR3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Skida1Q80YR3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Skida1Q80YR3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Skida1Q80YR3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Skida1Q80YR3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Skida1Q80YR3 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Skida1Q80YR3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.5■□□□□ 0.55
Skida1Q80YR3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.5■□□□□ 0.55
Skida1Q80YR3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Skida1Q80YR3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Skida1Q80YR3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.5■□□□□ 0.55
Skida1Q80YR3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Skida1Q80YR3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Skida1Q80YR3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Skida1Q80YR3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Skida1Q80YR3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Skida1Q80YR3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Skida1Q80YR3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Skida1Q80YR3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Skida1Q80YR3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Skida1Q80YR3 Mir5133-201ENSMUST00000174955 77 ntBASIC18.49■□□□□ 0.55
Skida1Q80YR3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.49■□□□□ 0.55
Skida1Q80YR3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.49■□□□□ 0.55
Skida1Q80YR3 Gm6649-201ENSMUST00000199743 1165 ntBASIC18.49■□□□□ 0.55
Skida1Q80YR3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Skida1Q80YR3 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Skida1Q80YR3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Skida1Q80YR3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Skida1Q80YR3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Skida1Q80YR3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Skida1Q80YR3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Skida1Q80YR3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Skida1Q80YR3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Skida1Q80YR3 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC18.48■□□□□ 0.55
Skida1Q80YR3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Skida1Q80YR3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Skida1Q80YR3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Skida1Q80YR3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Skida1Q80YR3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Skida1Q80YR3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Skida1Q80YR3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Skida1Q80YR3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Skida1Q80YR3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.47■□□□□ 0.55
Skida1Q80YR3 Gm37604-201ENSMUST00000191749 1272 ntBASIC18.47■□□□□ 0.55
Skida1Q80YR3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Skida1Q80YR3 CT009754.4-201ENSMUST00000221430 565 ntBASIC18.47■□□□□ 0.55
Skida1Q80YR3 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.47■□□□□ 0.55
Skida1Q80YR3 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC18.47■□□□□ 0.55
Skida1Q80YR3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Skida1Q80YR3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Skida1Q80YR3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Skida1Q80YR3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Skida1Q80YR3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Skida1Q80YR3 Gm649-201ENSMUST00000117284 1054 ntBASIC18.46■□□□□ 0.55
Skida1Q80YR3 Gm10653-202ENSMUST00000139570 835 ntBASIC18.46■□□□□ 0.55
Skida1Q80YR3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Skida1Q80YR3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC18.46■□□□□ 0.55
Skida1Q80YR3 Gm27801-201ENSMUST00000184174 223 ntBASIC18.46■□□□□ 0.55
Skida1Q80YR3 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Skida1Q80YR3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Skida1Q80YR3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Skida1Q80YR3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Skida1Q80YR3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Skida1Q80YR3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Skida1Q80YR3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Skida1Q80YR3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.46■□□□□ 0.54
Skida1Q80YR3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.54
Skida1Q80YR3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Skida1Q80YR3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Skida1Q80YR3 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.45■□□□□ 0.54
Skida1Q80YR3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Skida1Q80YR3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Skida1Q80YR3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Skida1Q80YR3 Mir6236-201ENSMUST00000184437 123 ntBASIC18.45■□□□□ 0.54
Skida1Q80YR3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.45■□□□□ 0.54
Skida1Q80YR3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms