Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.44■□□□□ 0.54
Ccdc116Q80X53 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc116Q80X53 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.44■□□□□ 0.54
Ccdc116Q80X53 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.44■□□□□ 0.54
Ccdc116Q80X53 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc116Q80X53 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc116Q80X53 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc116Q80X53 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc116Q80X53 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc116Q80X53 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.44■□□□□ 0.54
Ccdc116Q80X53 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc116Q80X53 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc116Q80X53 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc116Q80X53 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc116Q80X53 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc116Q80X53 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc116Q80X53 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.43■□□□□ 0.54
Ccdc116Q80X53 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc116Q80X53 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc116Q80X53 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc116Q80X53 Gm38205-201ENSMUST00000192243 258 ntBASIC18.43■□□□□ 0.54
Ccdc116Q80X53 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.43■□□□□ 0.54
Ccdc116Q80X53 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc116Q80X53 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc116Q80X53 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc116Q80X53 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc116Q80X53 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc116Q80X53 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc116Q80X53 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc116Q80X53 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc116Q80X53 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc116Q80X53 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc116Q80X53 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ccdc116Q80X53 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc116Q80X53 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ccdc116Q80X53 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc116Q80X53 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ccdc116Q80X53 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc116Q80X53 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc116Q80X53 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc116Q80X53 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc116Q80X53 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.42■□□□□ 0.54
Ccdc116Q80X53 Gm43060-201ENSMUST00000200621 289 ntBASIC18.42■□□□□ 0.54
Ccdc116Q80X53 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc116Q80X53 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ccdc116Q80X53 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ccdc116Q80X53 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc116Q80X53 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc116Q80X53 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc116Q80X53 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc116Q80X53 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc116Q80X53 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc116Q80X53 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc116Q80X53 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc116Q80X53 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc116Q80X53 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.41■□□□□ 0.54
Ccdc116Q80X53 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.41■□□□□ 0.54
Ccdc116Q80X53 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.41■□□□□ 0.54
Ccdc116Q80X53 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.41■□□□□ 0.54
Ccdc116Q80X53 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc116Q80X53 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ccdc116Q80X53 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.4■□□□□ 0.54
Ccdc116Q80X53 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc116Q80X53 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc116Q80X53 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc116Q80X53 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc116Q80X53 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.4■□□□□ 0.54
Ccdc116Q80X53 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Ccdc116Q80X53 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc116Q80X53 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc116Q80X53 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc116Q80X53 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc116Q80X53 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc116Q80X53 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc116Q80X53 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc116Q80X53 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc116Q80X53 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc116Q80X53 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc116Q80X53 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc116Q80X53 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.39■□□□□ 0.53
Ccdc116Q80X53 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.39■□□□□ 0.53
Ccdc116Q80X53 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc116Q80X53 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc116Q80X53 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc116Q80X53 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.39■□□□□ 0.53
Ccdc116Q80X53 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ccdc116Q80X53 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc116Q80X53 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc116Q80X53 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.39■□□□□ 0.53
Ccdc116Q80X53 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc116Q80X53 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc116Q80X53 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc116Q80X53 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc116Q80X53 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc116Q80X53 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc116Q80X53 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc116Q80X53 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc116Q80X53 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc116Q80X53 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc116Q80X53 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms