Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf40bQ80W14 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.71■■□□□ 1.07
Prpf40bQ80W14 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Prpf40bQ80W14 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf40bQ80W14 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf40bQ80W14 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf40bQ80W14 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf40bQ80W14 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Prpf40bQ80W14 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf40bQ80W14 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf40bQ80W14 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf40bQ80W14 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf40bQ80W14 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf40bQ80W14 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf40bQ80W14 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.7■■□□□ 1.06
Prpf40bQ80W14 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.7■■□□□ 1.06
Prpf40bQ80W14 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf40bQ80W14 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf40bQ80W14 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf40bQ80W14 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Prpf40bQ80W14 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf40bQ80W14 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf40bQ80W14 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf40bQ80W14 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Prpf40bQ80W14 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf40bQ80W14 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf40bQ80W14 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Prpf40bQ80W14 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.68■■□□□ 1.06
Prpf40bQ80W14 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Prpf40bQ80W14 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.68■■□□□ 1.06
Prpf40bQ80W14 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf40bQ80W14 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Prpf40bQ80W14 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf40bQ80W14 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf40bQ80W14 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.68■■□□□ 1.06
Prpf40bQ80W14 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.67■■□□□ 1.06
Prpf40bQ80W14 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf40bQ80W14 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Prpf40bQ80W14 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.67■■□□□ 1.06
Prpf40bQ80W14 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf40bQ80W14 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf40bQ80W14 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf40bQ80W14 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf40bQ80W14 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf40bQ80W14 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Prpf40bQ80W14 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf40bQ80W14 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.66■■□□□ 1.06
Prpf40bQ80W14 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf40bQ80W14 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.66■■□□□ 1.06
Prpf40bQ80W14 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.66■■□□□ 1.06
Prpf40bQ80W14 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Prpf40bQ80W14 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf40bQ80W14 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Prpf40bQ80W14 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf40bQ80W14 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf40bQ80W14 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf40bQ80W14 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf40bQ80W14 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf40bQ80W14 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf40bQ80W14 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
Prpf40bQ80W14 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf40bQ80W14 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf40bQ80W14 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Prpf40bQ80W14 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf40bQ80W14 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf40bQ80W14 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf40bQ80W14 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Prpf40bQ80W14 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.64■■□□□ 1.06
Prpf40bQ80W14 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Prpf40bQ80W14 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.64■■□□□ 1.05
Prpf40bQ80W14 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Prpf40bQ80W14 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Prpf40bQ80W14 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.64■■□□□ 1.05
Prpf40bQ80W14 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Prpf40bQ80W14 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Prpf40bQ80W14 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Prpf40bQ80W14 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Prpf40bQ80W14 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Prpf40bQ80W14 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf40bQ80W14 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf40bQ80W14 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf40bQ80W14 Gm13534-201ENSMUST00000121169 513 ntBASIC21.63■■□□□ 1.05
Prpf40bQ80W14 Gm6576-201ENSMUST00000169678 883 ntBASIC21.63■■□□□ 1.05
Prpf40bQ80W14 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Prpf40bQ80W14 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.63■■□□□ 1.05
Prpf40bQ80W14 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf40bQ80W14 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Prpf40bQ80W14 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf40bQ80W14 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.62■■□□□ 1.05
Prpf40bQ80W14 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf40bQ80W14 Gm27275-201ENSMUST00000184318 272 ntBASIC21.62■■□□□ 1.05
Prpf40bQ80W14 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.62■■□□□ 1.05
Prpf40bQ80W14 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Prpf40bQ80W14 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf40bQ80W14 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf40bQ80W14 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf40bQ80W14 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf40bQ80W14 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf40bQ80W14 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf40bQ80W14 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms