Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubr5Q80TP3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubr5Q80TP3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Ubr5Q80TP3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.52■□□□□ 0.24
Ubr5Q80TP3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubr5Q80TP3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ubr5Q80TP3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ubr5Q80TP3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Ubr5Q80TP3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ubr5Q80TP3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ubr5Q80TP3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.52■□□□□ 0.23
Ubr5Q80TP3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ubr5Q80TP3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr5Q80TP3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr5Q80TP3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Ubr5Q80TP3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr5Q80TP3 AA414768-201ENSMUST00000121924 1257 ntBASIC16.51■□□□□ 0.23
Ubr5Q80TP3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr5Q80TP3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ubr5Q80TP3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubr5Q80TP3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.51■□□□□ 0.23
Ubr5Q80TP3 Timm23-208ENSMUST00000226683 750 ntBASIC16.51■□□□□ 0.23
Ubr5Q80TP3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ubr5Q80TP3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ubr5Q80TP3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ubr5Q80TP3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.5■□□□□ 0.23
Ubr5Q80TP3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.5■□□□□ 0.23
Ubr5Q80TP3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Ubr5Q80TP3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr5Q80TP3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr5Q80TP3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Ubr5Q80TP3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr5Q80TP3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr5Q80TP3 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.5■□□□□ 0.23
Ubr5Q80TP3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr5Q80TP3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr5Q80TP3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.5■□□□□ 0.23
Ubr5Q80TP3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubr5Q80TP3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.5■□□□□ 0.23
Ubr5Q80TP3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr5Q80TP3 Gm9103-201ENSMUST00000119371 405 ntBASIC16.49■□□□□ 0.23
Ubr5Q80TP3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.49■□□□□ 0.23
Ubr5Q80TP3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.49■□□□□ 0.23
Ubr5Q80TP3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.49■□□□□ 0.23
Ubr5Q80TP3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr5Q80TP3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr5Q80TP3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr5Q80TP3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr5Q80TP3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.49■□□□□ 0.23
Ubr5Q80TP3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr5Q80TP3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr5Q80TP3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr5Q80TP3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr5Q80TP3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr5Q80TP3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr5Q80TP3 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.49■□□□□ 0.23
Ubr5Q80TP3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubr5Q80TP3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubr5Q80TP3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ubr5Q80TP3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.48■□□□□ 0.23
Ubr5Q80TP3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubr5Q80TP3 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.48■□□□□ 0.23
Ubr5Q80TP3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubr5Q80TP3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubr5Q80TP3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubr5Q80TP3 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.48■□□□□ 0.23
Ubr5Q80TP3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubr5Q80TP3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Ubr5Q80TP3 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.48■□□□□ 0.23
Ubr5Q80TP3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubr5Q80TP3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Ubr5Q80TP3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubr5Q80TP3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubr5Q80TP3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubr5Q80TP3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ubr5Q80TP3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ubr5Q80TP3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubr5Q80TP3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.47■□□□□ 0.23
Ubr5Q80TP3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.47■□□□□ 0.23
Ubr5Q80TP3 Gm18032-201ENSMUST00000222541 538 ntBASIC16.47■□□□□ 0.23
Ubr5Q80TP3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ubr5Q80TP3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.47■□□□□ 0.23
Ubr5Q80TP3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr5Q80TP3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr5Q80TP3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.46■□□□□ 0.23
Ubr5Q80TP3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr5Q80TP3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ubr5Q80TP3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ubr5Q80TP3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr5Q80TP3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.46■□□□□ 0.23
Ubr5Q80TP3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr5Q80TP3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubr5Q80TP3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr5Q80TP3 Gm11927-201ENSMUST00000118472 759 ntBASIC16.45■□□□□ 0.22
Ubr5Q80TP3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr5Q80TP3 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.45■□□□□ 0.22
Ubr5Q80TP3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.45■□□□□ 0.22
Ubr5Q80TP3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ubr5Q80TP3 Flg-201ENSMUST00000050758 1488 ntBASIC16.45■□□□□ 0.22
Ubr5Q80TP3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms