Protein–RNA interactions for Protein: Q6ZWS4

Cnih3, Protein cornichon homolog 3, mousemouse

Predictions only

Length 160 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih3Q6ZWS4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cnih3Q6ZWS4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cnih3Q6ZWS4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cnih3Q6ZWS4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cnih3Q6ZWS4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cnih3Q6ZWS4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cnih3Q6ZWS4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.32■□□□□ 0.36
Cnih3Q6ZWS4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.32■□□□□ 0.36
Cnih3Q6ZWS4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cnih3Q6ZWS4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.32■□□□□ 0.36
Cnih3Q6ZWS4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.32■□□□□ 0.36
Cnih3Q6ZWS4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cnih3Q6ZWS4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cnih3Q6ZWS4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cnih3Q6ZWS4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cnih3Q6ZWS4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cnih3Q6ZWS4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cnih3Q6ZWS4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cnih3Q6ZWS4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cnih3Q6ZWS4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cnih3Q6ZWS4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.32■□□□□ 0.36
Cnih3Q6ZWS4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cnih3Q6ZWS4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cnih3Q6ZWS4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cnih3Q6ZWS4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cnih3Q6ZWS4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cnih3Q6ZWS4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cnih3Q6ZWS4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cnih3Q6ZWS4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cnih3Q6ZWS4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cnih3Q6ZWS4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.31■□□□□ 0.36
Cnih3Q6ZWS4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cnih3Q6ZWS4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cnih3Q6ZWS4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cnih3Q6ZWS4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cnih3Q6ZWS4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cnih3Q6ZWS4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cnih3Q6ZWS4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.31■□□□□ 0.36
Cnih3Q6ZWS4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cnih3Q6ZWS4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cnih3Q6ZWS4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cnih3Q6ZWS4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cnih3Q6ZWS4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cnih3Q6ZWS4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cnih3Q6ZWS4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cnih3Q6ZWS4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
Cnih3Q6ZWS4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cnih3Q6ZWS4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cnih3Q6ZWS4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cnih3Q6ZWS4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cnih3Q6ZWS4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
Cnih3Q6ZWS4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cnih3Q6ZWS4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cnih3Q6ZWS4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cnih3Q6ZWS4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cnih3Q6ZWS4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnih3Q6ZWS4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnih3Q6ZWS4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnih3Q6ZWS4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnih3Q6ZWS4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cnih3Q6ZWS4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnih3Q6ZWS4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Cnih3Q6ZWS4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnih3Q6ZWS4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnih3Q6ZWS4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnih3Q6ZWS4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnih3Q6ZWS4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnih3Q6ZWS4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cnih3Q6ZWS4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cnih3Q6ZWS4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.27■□□□□ 0.36
Cnih3Q6ZWS4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cnih3Q6ZWS4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cnih3Q6ZWS4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.27■□□□□ 0.36
Cnih3Q6ZWS4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cnih3Q6ZWS4 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.27■□□□□ 0.36
Cnih3Q6ZWS4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cnih3Q6ZWS4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.27■□□□□ 0.35
Cnih3Q6ZWS4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms