Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kdm1aQ6ZQ88 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Kdm1aQ6ZQ88 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.82■□□□□ 0.92
Kdm1aQ6ZQ88 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Kdm1aQ6ZQ88 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.82■□□□□ 0.92
Kdm1aQ6ZQ88 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kdm1aQ6ZQ88 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kdm1aQ6ZQ88 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Kdm1aQ6ZQ88 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Kdm1aQ6ZQ88 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kdm1aQ6ZQ88 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kdm1aQ6ZQ88 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kdm1aQ6ZQ88 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Kdm1aQ6ZQ88 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kdm1aQ6ZQ88 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Kdm1aQ6ZQ88 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kdm1aQ6ZQ88 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kdm1aQ6ZQ88 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Kdm1aQ6ZQ88 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Kdm1aQ6ZQ88 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Kdm1aQ6ZQ88 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.81■□□□□ 0.92
Kdm1aQ6ZQ88 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kdm1aQ6ZQ88 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Kdm1aQ6ZQ88 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kdm1aQ6ZQ88 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kdm1aQ6ZQ88 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kdm1aQ6ZQ88 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kdm1aQ6ZQ88 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kdm1aQ6ZQ88 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kdm1aQ6ZQ88 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kdm1aQ6ZQ88 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Kdm1aQ6ZQ88 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kdm1aQ6ZQ88 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kdm1aQ6ZQ88 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.8■□□□□ 0.92
Kdm1aQ6ZQ88 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.8■□□□□ 0.92
Kdm1aQ6ZQ88 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Kdm1aQ6ZQ88 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Kdm1aQ6ZQ88 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kdm1aQ6ZQ88 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kdm1aQ6ZQ88 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Kdm1aQ6ZQ88 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Kdm1aQ6ZQ88 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Kdm1aQ6ZQ88 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Kdm1aQ6ZQ88 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Kdm1aQ6ZQ88 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Kdm1aQ6ZQ88 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Kdm1aQ6ZQ88 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Kdm1aQ6ZQ88 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Kdm1aQ6ZQ88 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kdm1aQ6ZQ88 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.78■□□□□ 0.92
Kdm1aQ6ZQ88 Gm43060-201ENSMUST00000200621 289 ntBASIC20.78■□□□□ 0.92
Kdm1aQ6ZQ88 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Kdm1aQ6ZQ88 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kdm1aQ6ZQ88 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
Kdm1aQ6ZQ88 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kdm1aQ6ZQ88 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Kdm1aQ6ZQ88 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Kdm1aQ6ZQ88 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Kdm1aQ6ZQ88 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Kdm1aQ6ZQ88 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Kdm1aQ6ZQ88 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.77■□□□□ 0.92
Kdm1aQ6ZQ88 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Kdm1aQ6ZQ88 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Kdm1aQ6ZQ88 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Kdm1aQ6ZQ88 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.76■□□□□ 0.91
Kdm1aQ6ZQ88 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Kdm1aQ6ZQ88 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.76■□□□□ 0.91
Kdm1aQ6ZQ88 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.76■□□□□ 0.91
Kdm1aQ6ZQ88 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Kdm1aQ6ZQ88 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Kdm1aQ6ZQ88 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Kdm1aQ6ZQ88 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Kdm1aQ6ZQ88 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.76■□□□□ 0.91
Kdm1aQ6ZQ88 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.75■□□□□ 0.91
Kdm1aQ6ZQ88 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Kdm1aQ6ZQ88 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Kdm1aQ6ZQ88 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Kdm1aQ6ZQ88 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.75■□□□□ 0.91
Kdm1aQ6ZQ88 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.75■□□□□ 0.91
Kdm1aQ6ZQ88 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.75■□□□□ 0.91
Kdm1aQ6ZQ88 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Kdm1aQ6ZQ88 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Kdm1aQ6ZQ88 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Kdm1aQ6ZQ88 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Kdm1aQ6ZQ88 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Kdm1aQ6ZQ88 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Kdm1aQ6ZQ88 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Kdm1aQ6ZQ88 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Kdm1aQ6ZQ88 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Kdm1aQ6ZQ88 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Kdm1aQ6ZQ88 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Kdm1aQ6ZQ88 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Kdm1aQ6ZQ88 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Kdm1aQ6ZQ88 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.74■□□□□ 0.91
Kdm1aQ6ZQ88 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.74■□□□□ 0.91
Kdm1aQ6ZQ88 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.74■□□□□ 0.91
Kdm1aQ6ZQ88 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Kdm1aQ6ZQ88 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Kdm1aQ6ZQ88 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Kdm1aQ6ZQ88 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms