Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Gm20049-201ENSMUST00000219950 730 ntBASIC22.66■■□□□ 1.22
Npc1l1Q6T3U4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Npc1l1Q6T3U4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Npc1l1Q6T3U4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC22.66■■□□□ 1.22
Npc1l1Q6T3U4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Npc1l1Q6T3U4 Gm18688-201ENSMUST00000204695 1859 ntBASIC22.65■■□□□ 1.22
Npc1l1Q6T3U4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Npc1l1Q6T3U4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC22.65■■□□□ 1.22
Npc1l1Q6T3U4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Npc1l1Q6T3U4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Npc1l1Q6T3U4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Npc1l1Q6T3U4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Npc1l1Q6T3U4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Npc1l1Q6T3U4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.22
Npc1l1Q6T3U4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Npc1l1Q6T3U4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Npc1l1Q6T3U4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Npc1l1Q6T3U4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC22.64■■□□□ 1.22
Npc1l1Q6T3U4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.22
Npc1l1Q6T3U4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Npc1l1Q6T3U4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Npc1l1Q6T3U4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Npc1l1Q6T3U4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC22.64■■□□□ 1.21
Npc1l1Q6T3U4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Npc1l1Q6T3U4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Npc1l1Q6T3U4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
Npc1l1Q6T3U4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Npc1l1Q6T3U4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC22.63■■□□□ 1.21
Npc1l1Q6T3U4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Npc1l1Q6T3U4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
Npc1l1Q6T3U4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC22.63■■□□□ 1.21
Npc1l1Q6T3U4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
Npc1l1Q6T3U4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Npc1l1Q6T3U4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Npc1l1Q6T3U4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Npc1l1Q6T3U4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Npc1l1Q6T3U4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Npc1l1Q6T3U4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Npc1l1Q6T3U4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC22.62■■□□□ 1.21
Npc1l1Q6T3U4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Npc1l1Q6T3U4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Npc1l1Q6T3U4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Npc1l1Q6T3U4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Npc1l1Q6T3U4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Npc1l1Q6T3U4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Npc1l1Q6T3U4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Npc1l1Q6T3U4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
Npc1l1Q6T3U4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Npc1l1Q6T3U4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Npc1l1Q6T3U4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Npc1l1Q6T3U4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Npc1l1Q6T3U4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Npc1l1Q6T3U4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Npc1l1Q6T3U4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC22.61■■□□□ 1.21
Npc1l1Q6T3U4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Npc1l1Q6T3U4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Npc1l1Q6T3U4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC22.6■■□□□ 1.21
Npc1l1Q6T3U4 Gm13168-201ENSMUST00000121771 632 ntBASIC22.6■■□□□ 1.21
Npc1l1Q6T3U4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Npc1l1Q6T3U4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Npc1l1Q6T3U4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
Npc1l1Q6T3U4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Npc1l1Q6T3U4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Npc1l1Q6T3U4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Npc1l1Q6T3U4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Npc1l1Q6T3U4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Npc1l1Q6T3U4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
Npc1l1Q6T3U4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Npc1l1Q6T3U4 Gm26524-201ENSMUST00000192339 390 ntBASIC22.59■■□□□ 1.21
Npc1l1Q6T3U4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.59■■□□□ 1.21
Npc1l1Q6T3U4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Npc1l1Q6T3U4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Npc1l1Q6T3U4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Npc1l1Q6T3U4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Npc1l1Q6T3U4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Npc1l1Q6T3U4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.59■■□□□ 1.21
Npc1l1Q6T3U4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Npc1l1Q6T3U4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Npc1l1Q6T3U4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Npc1l1Q6T3U4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Npc1l1Q6T3U4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC22.58■■□□□ 1.21
Npc1l1Q6T3U4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Npc1l1Q6T3U4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Npc1l1Q6T3U4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Npc1l1Q6T3U4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Npc1l1Q6T3U4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Npc1l1Q6T3U4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Npc1l1Q6T3U4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.21
Npc1l1Q6T3U4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Gm37856-201ENSMUST00000191634 999 ntBASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 AC135637.1-201ENSMUST00000227750 365 ntBASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Npc1l1Q6T3U4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms