Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rif1Q6PR54 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rif1Q6PR54 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rif1Q6PR54 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rif1Q6PR54 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rif1Q6PR54 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Rif1Q6PR54 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rif1Q6PR54 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rif1Q6PR54 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.9■□□□□ 0.14
Rif1Q6PR54 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rif1Q6PR54 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rif1Q6PR54 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rif1Q6PR54 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rif1Q6PR54 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rif1Q6PR54 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rif1Q6PR54 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Rif1Q6PR54 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.89■□□□□ 0.13
Rif1Q6PR54 Gm43438-201ENSMUST00000198133 379 ntBASIC15.89■□□□□ 0.13
Rif1Q6PR54 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rif1Q6PR54 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rif1Q6PR54 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rif1Q6PR54 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.89■□□□□ 0.13
Rif1Q6PR54 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Rif1Q6PR54 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rif1Q6PR54 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rif1Q6PR54 Gm18958-201ENSMUST00000174258 762 ntBASIC15.89■□□□□ 0.13
Rif1Q6PR54 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rif1Q6PR54 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.89■□□□□ 0.13
Rif1Q6PR54 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rif1Q6PR54 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rif1Q6PR54 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rif1Q6PR54 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rif1Q6PR54 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Rif1Q6PR54 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rif1Q6PR54 Gm27704-201ENSMUST00000185094 107 ntBASIC15.88■□□□□ 0.13
Rif1Q6PR54 Gm18959-201ENSMUST00000208954 655 ntBASIC15.88■□□□□ 0.13
Rif1Q6PR54 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rif1Q6PR54 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rif1Q6PR54 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rif1Q6PR54 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Rif1Q6PR54 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rif1Q6PR54 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Rif1Q6PR54 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.87■□□□□ 0.13
Rif1Q6PR54 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.87■□□□□ 0.13
Rif1Q6PR54 Gm8587-201ENSMUST00000076538 843 ntBASIC15.87■□□□□ 0.13
Rif1Q6PR54 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rif1Q6PR54 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Rif1Q6PR54 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rif1Q6PR54 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.87■□□□□ 0.13
Rif1Q6PR54 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.87■□□□□ 0.13
Rif1Q6PR54 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rif1Q6PR54 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Rif1Q6PR54 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rif1Q6PR54 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Rif1Q6PR54 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.86■□□□□ 0.13
Rif1Q6PR54 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rif1Q6PR54 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.86■□□□□ 0.13
Rif1Q6PR54 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rif1Q6PR54 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Rif1Q6PR54 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rif1Q6PR54 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Rif1Q6PR54 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Rif1Q6PR54 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rif1Q6PR54 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rif1Q6PR54 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rif1Q6PR54 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rif1Q6PR54 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Rif1Q6PR54 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rif1Q6PR54 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rif1Q6PR54 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rif1Q6PR54 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rif1Q6PR54 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rif1Q6PR54 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rif1Q6PR54 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rif1Q6PR54 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rif1Q6PR54 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.85■□□□□ 0.13
Rif1Q6PR54 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rif1Q6PR54 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.85■□□□□ 0.13
Rif1Q6PR54 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rif1Q6PR54 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.85■□□□□ 0.13
Rif1Q6PR54 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rif1Q6PR54 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rif1Q6PR54 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rif1Q6PR54 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rif1Q6PR54 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rif1Q6PR54 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rif1Q6PR54 Gm27525-201ENSMUST00000184465 107 ntBASIC15.84■□□□□ 0.13
Rif1Q6PR54 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rif1Q6PR54 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.84■□□□□ 0.13
Rif1Q6PR54 Gm5186-201ENSMUST00000218781 920 ntBASIC15.84■□□□□ 0.13
Rif1Q6PR54 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rif1Q6PR54 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rif1Q6PR54 Gm18115-201ENSMUST00000221209 621 ntBASIC15.84■□□□□ 0.13
Rif1Q6PR54 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rif1Q6PR54 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rif1Q6PR54 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rif1Q6PR54 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rif1Q6PR54 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rif1Q6PR54 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rif1Q6PR54 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 115.9 ms