Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sp140Q6NSQ5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sp140Q6NSQ5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sp140Q6NSQ5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sp140Q6NSQ5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sp140Q6NSQ5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sp140Q6NSQ5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sp140Q6NSQ5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sp140Q6NSQ5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sp140Q6NSQ5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sp140Q6NSQ5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sp140Q6NSQ5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.1■□□□□ 0.65
Sp140Q6NSQ5 Gm38205-201ENSMUST00000192243 258 ntBASIC19.1■□□□□ 0.65
Sp140Q6NSQ5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sp140Q6NSQ5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sp140Q6NSQ5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.1■□□□□ 0.65
Sp140Q6NSQ5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sp140Q6NSQ5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sp140Q6NSQ5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sp140Q6NSQ5 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.1■□□□□ 0.65
Sp140Q6NSQ5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sp140Q6NSQ5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sp140Q6NSQ5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sp140Q6NSQ5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sp140Q6NSQ5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.08■□□□□ 0.64
Sp140Q6NSQ5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.08■□□□□ 0.64
Sp140Q6NSQ5 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.08■□□□□ 0.64
Sp140Q6NSQ5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sp140Q6NSQ5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sp140Q6NSQ5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sp140Q6NSQ5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sp140Q6NSQ5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Sp140Q6NSQ5 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sp140Q6NSQ5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sp140Q6NSQ5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sp140Q6NSQ5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sp140Q6NSQ5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sp140Q6NSQ5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sp140Q6NSQ5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sp140Q6NSQ5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sp140Q6NSQ5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sp140Q6NSQ5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sp140Q6NSQ5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sp140Q6NSQ5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sp140Q6NSQ5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sp140Q6NSQ5 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sp140Q6NSQ5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.06■□□□□ 0.64
Sp140Q6NSQ5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sp140Q6NSQ5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sp140Q6NSQ5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sp140Q6NSQ5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
Sp140Q6NSQ5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sp140Q6NSQ5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sp140Q6NSQ5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sp140Q6NSQ5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sp140Q6NSQ5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.06■□□□□ 0.64
Sp140Q6NSQ5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Sp140Q6NSQ5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Sp140Q6NSQ5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sp140Q6NSQ5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sp140Q6NSQ5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sp140Q6NSQ5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.06■□□□□ 0.64
Sp140Q6NSQ5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sp140Q6NSQ5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sp140Q6NSQ5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sp140Q6NSQ5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sp140Q6NSQ5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sp140Q6NSQ5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sp140Q6NSQ5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sp140Q6NSQ5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sp140Q6NSQ5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Sp140Q6NSQ5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.05■□□□□ 0.64
Sp140Q6NSQ5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sp140Q6NSQ5 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sp140Q6NSQ5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sp140Q6NSQ5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sp140Q6NSQ5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sp140Q6NSQ5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sp140Q6NSQ5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms