Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt42Q6IFX2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt42Q6IFX2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Krt42Q6IFX2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Krt42Q6IFX2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt42Q6IFX2 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.33■□□□□ 0.68
Krt42Q6IFX2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt42Q6IFX2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Krt42Q6IFX2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.32■□□□□ 0.68
Krt42Q6IFX2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Krt42Q6IFX2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt42Q6IFX2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt42Q6IFX2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.32■□□□□ 0.68
Krt42Q6IFX2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Krt42Q6IFX2 Serp2-204ENSMUST00000228055 705 ntBASIC19.32■□□□□ 0.68
Krt42Q6IFX2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt42Q6IFX2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.32■□□□□ 0.68
Krt42Q6IFX2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Krt42Q6IFX2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Krt42Q6IFX2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Krt42Q6IFX2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
Krt42Q6IFX2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt42Q6IFX2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Krt42Q6IFX2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt42Q6IFX2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt42Q6IFX2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.31■□□□□ 0.68
Krt42Q6IFX2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Krt42Q6IFX2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt42Q6IFX2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt42Q6IFX2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Krt42Q6IFX2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt42Q6IFX2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Krt42Q6IFX2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt42Q6IFX2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt42Q6IFX2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Krt42Q6IFX2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt42Q6IFX2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Krt42Q6IFX2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Krt42Q6IFX2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Krt42Q6IFX2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Krt42Q6IFX2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Krt42Q6IFX2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Krt42Q6IFX2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt42Q6IFX2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt42Q6IFX2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt42Q6IFX2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt42Q6IFX2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Krt42Q6IFX2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt42Q6IFX2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt42Q6IFX2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Krt42Q6IFX2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt42Q6IFX2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Krt42Q6IFX2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt42Q6IFX2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt42Q6IFX2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt42Q6IFX2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt42Q6IFX2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.28■□□□□ 0.68
Krt42Q6IFX2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt42Q6IFX2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt42Q6IFX2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Krt42Q6IFX2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Krt42Q6IFX2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt42Q6IFX2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.28■□□□□ 0.68
Krt42Q6IFX2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt42Q6IFX2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt42Q6IFX2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt42Q6IFX2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt42Q6IFX2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt42Q6IFX2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt42Q6IFX2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt42Q6IFX2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt42Q6IFX2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.27■□□□□ 0.68
Krt42Q6IFX2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt42Q6IFX2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt42Q6IFX2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt42Q6IFX2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt42Q6IFX2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Krt42Q6IFX2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Krt42Q6IFX2 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.27■□□□□ 0.67
Krt42Q6IFX2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Krt42Q6IFX2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Krt42Q6IFX2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Krt42Q6IFX2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Krt42Q6IFX2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
Krt42Q6IFX2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt42Q6IFX2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt42Q6IFX2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt42Q6IFX2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.26■□□□□ 0.67
Krt42Q6IFX2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Krt42Q6IFX2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt42Q6IFX2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Krt42Q6IFX2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt42Q6IFX2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt42Q6IFX2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Krt42Q6IFX2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Krt42Q6IFX2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Krt42Q6IFX2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt42Q6IFX2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt42Q6IFX2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt42Q6IFX2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms