Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga7Q6DD96 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga7Q6DD96 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga7Q6DD96 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga7Q6DD96 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga7Q6DD96 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga7Q6DD96 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga7Q6DD96 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga7Q6DD96 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga7Q6DD96 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga7Q6DD96 Gm43173-201ENSMUST00000202246 593 ntBASIC18.23■□□□□ 0.51
Pcdhga7Q6DD96 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga7Q6DD96 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga7Q6DD96 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga7Q6DD96 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga7Q6DD96 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga7Q6DD96 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga7Q6DD96 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga7Q6DD96 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga7Q6DD96 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga7Q6DD96 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.22■□□□□ 0.51
Pcdhga7Q6DD96 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga7Q6DD96 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Pcdhga7Q6DD96 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.22■□□□□ 0.51
Pcdhga7Q6DD96 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga7Q6DD96 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.22■□□□□ 0.51
Pcdhga7Q6DD96 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga7Q6DD96 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhga7Q6DD96 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga7Q6DD96 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga7Q6DD96 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga7Q6DD96 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga7Q6DD96 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga7Q6DD96 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhga7Q6DD96 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga7Q6DD96 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga7Q6DD96 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga7Q6DD96 Gm11421-201ENSMUST00000122124 294 ntBASIC18.21■□□□□ 0.51
Pcdhga7Q6DD96 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga7Q6DD96 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhga7Q6DD96 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhga7Q6DD96 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga7Q6DD96 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga7Q6DD96 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga7Q6DD96 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga7Q6DD96 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhga7Q6DD96 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga7Q6DD96 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga7Q6DD96 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga7Q6DD96 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga7Q6DD96 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhga7Q6DD96 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga7Q6DD96 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga7Q6DD96 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga7Q6DD96 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga7Q6DD96 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga7Q6DD96 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhga7Q6DD96 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhga7Q6DD96 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhga7Q6DD96 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga7Q6DD96 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga7Q6DD96 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga7Q6DD96 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga7Q6DD96 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga7Q6DD96 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Pcdhga7Q6DD96 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga7Q6DD96 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhga7Q6DD96 Gm8493-201ENSMUST00000196881 489 ntBASIC18.19■□□□□ 0.5
Pcdhga7Q6DD96 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.19■□□□□ 0.5
Pcdhga7Q6DD96 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Pcdhga7Q6DD96 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga7Q6DD96 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga7Q6DD96 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga7Q6DD96 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga7Q6DD96 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.18■□□□□ 0.5
Pcdhga7Q6DD96 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhga7Q6DD96 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pcdhga7Q6DD96 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga7Q6DD96 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga7Q6DD96 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhga7Q6DD96 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga7Q6DD96 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga7Q6DD96 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga7Q6DD96 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga7Q6DD96 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhga7Q6DD96 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhga7Q6DD96 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga7Q6DD96 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga7Q6DD96 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.17■□□□□ 0.5
Pcdhga7Q6DD96 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga7Q6DD96 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdhga7Q6DD96 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga7Q6DD96 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga7Q6DD96 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga7Q6DD96 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Pcdhga7Q6DD96 Gm12821-201ENSMUST00000120022 600 ntBASIC18.17■□□□□ 0.5
Pcdhga7Q6DD96 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhga7Q6DD96 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Pcdhga7Q6DD96 Gm27454-201ENSMUST00000185090 204 ntBASIC18.17■□□□□ 0.5
Pcdhga7Q6DD96 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms