Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Notch3Q61982 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Notch3Q61982 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Notch3Q61982 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Notch3Q61982 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Notch3Q61982 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Notch3Q61982 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.37□□□□□ -0.11
Notch3Q61982 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Notch3Q61982 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Notch3Q61982 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Notch3Q61982 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Notch3Q61982 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Notch3Q61982 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Notch3Q61982 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Notch3Q61982 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.37□□□□□ -0.11
Notch3Q61982 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Notch3Q61982 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Notch3Q61982 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Notch3Q61982 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Notch3Q61982 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Notch3Q61982 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Notch3Q61982 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Notch3Q61982 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.36□□□□□ -0.11
Notch3Q61982 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Notch3Q61982 Gm26524-201ENSMUST00000192339 390 ntBASIC14.36□□□□□ -0.11
Notch3Q61982 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Notch3Q61982 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Notch3Q61982 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.36□□□□□ -0.11
Notch3Q61982 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Notch3Q61982 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Notch3Q61982 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Notch3Q61982 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Notch3Q61982 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Notch3Q61982 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Notch3Q61982 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.35□□□□□ -0.11
Notch3Q61982 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.35□□□□□ -0.11
Notch3Q61982 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Notch3Q61982 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Notch3Q61982 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Notch3Q61982 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.35□□□□□ -0.11
Notch3Q61982 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Notch3Q61982 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Notch3Q61982 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Notch3Q61982 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Notch3Q61982 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Notch3Q61982 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
Notch3Q61982 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.35□□□□□ -0.11
Notch3Q61982 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Notch3Q61982 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Notch3Q61982 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Notch3Q61982 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.35□□□□□ -0.11
Notch3Q61982 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Notch3Q61982 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.35□□□□□ -0.11
Notch3Q61982 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Notch3Q61982 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Notch3Q61982 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Notch3Q61982 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Notch3Q61982 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Notch3Q61982 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Notch3Q61982 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Notch3Q61982 Mir6982-201ENSMUST00000184354 68 ntBASIC14.34□□□□□ -0.11
Notch3Q61982 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.34□□□□□ -0.11
Notch3Q61982 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Notch3Q61982 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Notch3Q61982 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Notch3Q61982 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Notch3Q61982 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Notch3Q61982 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Notch3Q61982 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Notch3Q61982 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.34□□□□□ -0.11
Notch3Q61982 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.33□□□□□ -0.11
Notch3Q61982 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.33□□□□□ -0.11
Notch3Q61982 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.33□□□□□ -0.11
Notch3Q61982 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Notch3Q61982 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Notch3Q61982 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Notch3Q61982 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Notch3Q61982 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Notch3Q61982 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.33□□□□□ -0.12
Notch3Q61982 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.33□□□□□ -0.12
Notch3Q61982 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Notch3Q61982 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.33□□□□□ -0.12
Notch3Q61982 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Notch3Q61982 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.33□□□□□ -0.12
Notch3Q61982 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Notch3Q61982 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Notch3Q61982 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Notch3Q61982 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Notch3Q61982 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Notch3Q61982 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Notch3Q61982 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Notch3Q61982 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Notch3Q61982 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Notch3Q61982 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Notch3Q61982 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Notch3Q61982 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Notch3Q61982 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.32□□□□□ -0.12
Notch3Q61982 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.32□□□□□ -0.12
Notch3Q61982 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Notch3Q61982 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms