Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd47Q61735 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cd47Q61735 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Cd47Q61735 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd47Q61735 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd47Q61735 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd47Q61735 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd47Q61735 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd47Q61735 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd47Q61735 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cd47Q61735 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd47Q61735 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd47Q61735 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cd47Q61735 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd47Q61735 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd47Q61735 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Cd47Q61735 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd47Q61735 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd47Q61735 Smad6-203ENSMUST00000179458 273 ntBASIC17.07■□□□□ 0.32
Cd47Q61735 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.07■□□□□ 0.32
Cd47Q61735 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.07■□□□□ 0.32
Cd47Q61735 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
Cd47Q61735 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cd47Q61735 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.07■□□□□ 0.32
Cd47Q61735 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cd47Q61735 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd47Q61735 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd47Q61735 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd47Q61735 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd47Q61735 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Cd47Q61735 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.06■□□□□ 0.32
Cd47Q61735 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.06■□□□□ 0.32
Cd47Q61735 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd47Q61735 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.06■□□□□ 0.32
Cd47Q61735 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd47Q61735 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd47Q61735 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd47Q61735 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd47Q61735 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd47Q61735 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cd47Q61735 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cd47Q61735 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd47Q61735 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd47Q61735 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd47Q61735 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd47Q61735 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd47Q61735 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd47Q61735 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd47Q61735 Gm12821-201ENSMUST00000120022 600 ntBASIC17.05■□□□□ 0.32
Cd47Q61735 Gm27454-201ENSMUST00000185090 204 ntBASIC17.05■□□□□ 0.32
Cd47Q61735 Gm8493-201ENSMUST00000196881 489 ntBASIC17.05■□□□□ 0.32
Cd47Q61735 Gm43173-201ENSMUST00000202246 593 ntBASIC17.05■□□□□ 0.32
Cd47Q61735 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd47Q61735 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd47Q61735 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd47Q61735 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd47Q61735 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.05■□□□□ 0.32
Cd47Q61735 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd47Q61735 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Cd47Q61735 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd47Q61735 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd47Q61735 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd47Q61735 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd47Q61735 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd47Q61735 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.04■□□□□ 0.32
Cd47Q61735 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd47Q61735 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd47Q61735 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd47Q61735 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cd47Q61735 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd47Q61735 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd47Q61735 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd47Q61735 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd47Q61735 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Cd47Q61735 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd47Q61735 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Cd47Q61735 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd47Q61735 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Cd47Q61735 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd47Q61735 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cd47Q61735 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd47Q61735 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd47Q61735 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd47Q61735 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.03■□□□□ 0.32
Cd47Q61735 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd47Q61735 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.03■□□□□ 0.32
Cd47Q61735 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cd47Q61735 Gm11421-201ENSMUST00000122124 294 ntBASIC17.03■□□□□ 0.32
Cd47Q61735 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.03■□□□□ 0.32
Cd47Q61735 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.03■□□□□ 0.32
Cd47Q61735 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd47Q61735 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Cd47Q61735 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd47Q61735 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cd47Q61735 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd47Q61735 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.02■□□□□ 0.32
Cd47Q61735 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd47Q61735 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd47Q61735 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Cd47Q61735 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms