Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox17Q61473 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox17Q61473 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox17Q61473 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.63■□□□□ 0.41
Sox17Q61473 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox17Q61473 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox17Q61473 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox17Q61473 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox17Q61473 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sox17Q61473 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox17Q61473 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.63■□□□□ 0.41
Sox17Q61473 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Sox17Q61473 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Sox17Q61473 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Sox17Q61473 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
Sox17Q61473 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Sox17Q61473 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox17Q61473 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox17Q61473 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox17Q61473 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox17Q61473 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sox17Q61473 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sox17Q61473 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Sox17Q61473 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox17Q61473 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox17Q61473 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox17Q61473 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.61■□□□□ 0.41
Sox17Q61473 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sox17Q61473 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.61■□□□□ 0.41
Sox17Q61473 Gm15820-201ENSMUST00000201566 728 ntBASIC17.61■□□□□ 0.41
Sox17Q61473 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Sox17Q61473 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox17Q61473 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox17Q61473 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox17Q61473 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
Sox17Q61473 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sox17Q61473 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox17Q61473 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox17Q61473 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox17Q61473 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox17Q61473 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox17Q61473 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox17Q61473 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox17Q61473 Gm7417-201ENSMUST00000192950 473 ntBASIC17.6■□□□□ 0.41
Sox17Q61473 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sox17Q61473 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox17Q61473 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox17Q61473 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox17Q61473 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sox17Q61473 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sox17Q61473 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sox17Q61473 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sox17Q61473 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox17Q61473 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox17Q61473 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox17Q61473 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.59■□□□□ 0.41
Sox17Q61473 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sox17Q61473 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox17Q61473 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox17Q61473 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox17Q61473 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
Sox17Q61473 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox17Q61473 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Sox17Q61473 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox17Q61473 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox17Q61473 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox17Q61473 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.58■□□□□ 0.41
Sox17Q61473 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sox17Q61473 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox17Q61473 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox17Q61473 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sox17Q61473 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Sox17Q61473 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox17Q61473 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox17Q61473 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.58■□□□□ 0.4
Sox17Q61473 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox17Q61473 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox17Q61473 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.58■□□□□ 0.4
Sox17Q61473 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox17Q61473 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox17Q61473 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox17Q61473 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
Sox17Q61473 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox17Q61473 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox17Q61473 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox17Q61473 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox17Q61473 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox17Q61473 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox17Q61473 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox17Q61473 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox17Q61473 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox17Q61473 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox17Q61473 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox17Q61473 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Sox17Q61473 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox17Q61473 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox17Q61473 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sox17Q61473 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sox17Q61473 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox17Q61473 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms