Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Smarcd1Q61466 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
Smarcd1Q61466 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd1Q61466 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.65■□□□□ 0.74
Smarcd1Q61466 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd1Q61466 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd1Q61466 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Smarcd1Q61466 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Smarcd1Q61466 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd1Q61466 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd1Q61466 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd1Q61466 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd1Q61466 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smarcd1Q61466 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smarcd1Q61466 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcd1Q61466 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Smarcd1Q61466 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcd1Q61466 Gm6211-202ENSMUST00000167849 925 ntBASIC19.64■□□□□ 0.73
Smarcd1Q61466 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcd1Q61466 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Smarcd1Q61466 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcd1Q61466 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcd1Q61466 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Smarcd1Q61466 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcd1Q61466 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcd1Q61466 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcd1Q61466 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcd1Q61466 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.63■□□□□ 0.73
Smarcd1Q61466 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcd1Q61466 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcd1Q61466 Gm13148-201ENSMUST00000118892 745 ntBASIC19.63■□□□□ 0.73
Smarcd1Q61466 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.63■□□□□ 0.73
Smarcd1Q61466 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcd1Q61466 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Smarcd1Q61466 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcd1Q61466 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcd1Q61466 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcd1Q61466 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Smarcd1Q61466 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd1Q61466 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd1Q61466 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd1Q61466 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd1Q61466 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Smarcd1Q61466 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd1Q61466 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd1Q61466 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.62■□□□□ 0.73
Smarcd1Q61466 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.62■□□□□ 0.73
Smarcd1Q61466 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd1Q61466 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd1Q61466 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd1Q61466 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd1Q61466 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd1Q61466 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Smarcd1Q61466 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd1Q61466 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd1Q61466 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Smarcd1Q61466 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Smarcd1Q61466 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd1Q61466 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.61■□□□□ 0.73
Smarcd1Q61466 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Smarcd1Q61466 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Smarcd1Q61466 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Smarcd1Q61466 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.61■□□□□ 0.73
Smarcd1Q61466 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd1Q61466 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcd1Q61466 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Smarcd1Q61466 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcd1Q61466 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcd1Q61466 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcd1Q61466 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.6■□□□□ 0.73
Smarcd1Q61466 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.6■□□□□ 0.73
Smarcd1Q61466 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcd1Q61466 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.6■□□□□ 0.73
Smarcd1Q61466 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcd1Q61466 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Smarcd1Q61466 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcd1Q61466 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcd1Q61466 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcd1Q61466 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcd1Q61466 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcd1Q61466 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcd1Q61466 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Smarcd1Q61466 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.59■□□□□ 0.73
Smarcd1Q61466 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Smarcd1Q61466 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcd1Q61466 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarcd1Q61466 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarcd1Q61466 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarcd1Q61466 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Smarcd1Q61466 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.58■□□□□ 0.72
Smarcd1Q61466 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Smarcd1Q61466 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcd1Q61466 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcd1Q61466 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Smarcd1Q61466 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcd1Q61466 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcd1Q61466 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcd1Q61466 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcd1Q61466 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcd1Q61466 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms