Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Sdf4Q61112 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sdf4Q61112 Gm13234-201ENSMUST00000120010 747 ntBASIC19.1■□□□□ 0.65
Sdf4Q61112 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sdf4Q61112 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Sdf4Q61112 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sdf4Q61112 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sdf4Q61112 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Sdf4Q61112 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sdf4Q61112 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Sdf4Q61112 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdf4Q61112 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.09■□□□□ 0.65
Sdf4Q61112 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdf4Q61112 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sdf4Q61112 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sdf4Q61112 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Sdf4Q61112 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Sdf4Q61112 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sdf4Q61112 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sdf4Q61112 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sdf4Q61112 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sdf4Q61112 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Sdf4Q61112 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sdf4Q61112 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sdf4Q61112 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Sdf4Q61112 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sdf4Q61112 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Sdf4Q61112 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.08■□□□□ 0.64
Sdf4Q61112 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sdf4Q61112 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sdf4Q61112 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sdf4Q61112 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sdf4Q61112 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Sdf4Q61112 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.07■□□□□ 0.64
Sdf4Q61112 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sdf4Q61112 Gm5874-201ENSMUST00000096101 508 ntBASIC19.07■□□□□ 0.64
Sdf4Q61112 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sdf4Q61112 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.07■□□□□ 0.64
Sdf4Q61112 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sdf4Q61112 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sdf4Q61112 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Sdf4Q61112 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sdf4Q61112 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sdf4Q61112 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sdf4Q61112 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Sdf4Q61112 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
Sdf4Q61112 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sdf4Q61112 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.06■□□□□ 0.64
Sdf4Q61112 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sdf4Q61112 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.06■□□□□ 0.64
Sdf4Q61112 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.06■□□□□ 0.64
Sdf4Q61112 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Sdf4Q61112 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.06■□□□□ 0.64
Sdf4Q61112 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sdf4Q61112 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sdf4Q61112 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sdf4Q61112 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sdf4Q61112 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sdf4Q61112 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sdf4Q61112 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sdf4Q61112 Gm13146-201ENSMUST00000118508 780 ntBASIC19.05■□□□□ 0.64
Sdf4Q61112 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sdf4Q61112 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Sdf4Q61112 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sdf4Q61112 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Sdf4Q61112 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sdf4Q61112 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sdf4Q61112 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.05■□□□□ 0.64
Sdf4Q61112 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sdf4Q61112 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sdf4Q61112 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.05■□□□□ 0.64
Sdf4Q61112 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sdf4Q61112 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sdf4Q61112 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sdf4Q61112 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sdf4Q61112 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sdf4Q61112 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.04■□□□□ 0.64
Sdf4Q61112 Gm18284-201ENSMUST00000172604 624 ntBASIC19.04■□□□□ 0.64
Sdf4Q61112 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sdf4Q61112 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.04■□□□□ 0.64
Sdf4Q61112 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sdf4Q61112 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.04■□□□□ 0.64
Sdf4Q61112 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sdf4Q61112 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sdf4Q61112 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdf4Q61112 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Sdf4Q61112 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Sdf4Q61112 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sdf4Q61112 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Sdf4Q61112 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdf4Q61112 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Sdf4Q61112 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdf4Q61112 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.03■□□□□ 0.64
Sdf4Q61112 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdf4Q61112 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdf4Q61112 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdf4Q61112 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Sdf4Q61112 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdf4Q61112 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Sdf4Q61112 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms