Protein–RNA interactions for Protein: Q61001

Lama5, Laminin subunit alpha-5, mousemouse

Predictions only

Length 3,718 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lama5Q61001 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lama5Q61001 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lama5Q61001 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Lama5Q61001 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lama5Q61001 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lama5Q61001 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.42■□□□□ 0.22
Lama5Q61001 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lama5Q61001 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lama5Q61001 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lama5Q61001 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lama5Q61001 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lama5Q61001 Gm21814-202ENSMUST00000203277 873 ntBASIC16.41■□□□□ 0.22
Lama5Q61001 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lama5Q61001 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lama5Q61001 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lama5Q61001 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lama5Q61001 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
Lama5Q61001 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lama5Q61001 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lama5Q61001 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lama5Q61001 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lama5Q61001 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.41■□□□□ 0.22
Lama5Q61001 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Lama5Q61001 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.41■□□□□ 0.22
Lama5Q61001 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lama5Q61001 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Lama5Q61001 Gm7889-201ENSMUST00000185591 958 ntBASIC16.4■□□□□ 0.22
Lama5Q61001 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.4■□□□□ 0.22
Lama5Q61001 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Lama5Q61001 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lama5Q61001 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lama5Q61001 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lama5Q61001 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lama5Q61001 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lama5Q61001 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lama5Q61001 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lama5Q61001 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lama5Q61001 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lama5Q61001 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.4■□□□□ 0.22
Lama5Q61001 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lama5Q61001 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.4■□□□□ 0.22
Lama5Q61001 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lama5Q61001 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lama5Q61001 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Lama5Q61001 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Lama5Q61001 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lama5Q61001 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lama5Q61001 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lama5Q61001 Ank2-226ENSMUST00000189368 339 ntBASIC16.39■□□□□ 0.21
Lama5Q61001 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Lama5Q61001 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lama5Q61001 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.39■□□□□ 0.21
Lama5Q61001 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.39■□□□□ 0.21
Lama5Q61001 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.39■□□□□ 0.21
Lama5Q61001 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.38■□□□□ 0.21
Lama5Q61001 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lama5Q61001 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lama5Q61001 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lama5Q61001 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lama5Q61001 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lama5Q61001 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lama5Q61001 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lama5Q61001 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lama5Q61001 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.38■□□□□ 0.21
Lama5Q61001 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lama5Q61001 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lama5Q61001 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lama5Q61001 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lama5Q61001 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lama5Q61001 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lama5Q61001 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lama5Q61001 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lama5Q61001 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lama5Q61001 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lama5Q61001 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lama5Q61001 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lama5Q61001 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lama5Q61001 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lama5Q61001 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lama5Q61001 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lama5Q61001 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lama5Q61001 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Lama5Q61001 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.36■□□□□ 0.21
Lama5Q61001 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lama5Q61001 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lama5Q61001 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lama5Q61001 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lama5Q61001 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lama5Q61001 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lama5Q61001 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lama5Q61001 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lama5Q61001 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lama5Q61001 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lama5Q61001 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.35■□□□□ 0.21
Lama5Q61001 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
Lama5Q61001 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Lama5Q61001 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Lama5Q61001 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lama5Q61001 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lama5Q61001 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms