Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7-2Q5R1I3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7-2Q5R1I3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7-2Q5R1I3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav7-2Q5R1I3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7-2Q5R1I3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7-2Q5R1I3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7-2Q5R1I3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7-2Q5R1I3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7-2Q5R1I3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav7-2Q5R1I3 Gm12251-201ENSMUST00000117893 792 ntBASIC13.96□□□□□ -0.17
Trav7-2Q5R1I3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7-2Q5R1I3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.96□□□□□ -0.17
Trav7-2Q5R1I3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7-2Q5R1I3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7-2Q5R1I3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav7-2Q5R1I3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav7-2Q5R1I3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Trav7-2Q5R1I3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav7-2Q5R1I3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav7-2Q5R1I3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav7-2Q5R1I3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7-2Q5R1I3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7-2Q5R1I3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7-2Q5R1I3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7-2Q5R1I3 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.95□□□□□ -0.18
Trav7-2Q5R1I3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Trav7-2Q5R1I3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav7-2Q5R1I3 Gm45417-201ENSMUST00000209533 758 ntBASIC13.95□□□□□ -0.18
Trav7-2Q5R1I3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7-2Q5R1I3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7-2Q5R1I3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7-2Q5R1I3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Trav7-2Q5R1I3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7-2Q5R1I3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav7-2Q5R1I3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav7-2Q5R1I3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7-2Q5R1I3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7-2Q5R1I3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7-2Q5R1I3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7-2Q5R1I3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.93□□□□□ -0.18
Trav7-2Q5R1I3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7-2Q5R1I3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.93□□□□□ -0.18
Trav7-2Q5R1I3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7-2Q5R1I3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.93□□□□□ -0.18
Trav7-2Q5R1I3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7-2Q5R1I3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7-2Q5R1I3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav7-2Q5R1I3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7-2Q5R1I3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7-2Q5R1I3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7-2Q5R1I3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Gm43173-201ENSMUST00000202246 593 ntBASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Gm6139-201ENSMUST00000079261 882 ntBASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7-2Q5R1I3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav7-2Q5R1I3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 144.6 ms