Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.18■□□□□ 0.66
Rnf43Q5NCP0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.18■□□□□ 0.66
Rnf43Q5NCP0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Rnf43Q5NCP0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf43Q5NCP0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf43Q5NCP0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.18■□□□□ 0.66
Rnf43Q5NCP0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf43Q5NCP0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf43Q5NCP0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf43Q5NCP0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf43Q5NCP0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf43Q5NCP0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf43Q5NCP0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Rnf43Q5NCP0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.17■□□□□ 0.66
Rnf43Q5NCP0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.17■□□□□ 0.66
Rnf43Q5NCP0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf43Q5NCP0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf43Q5NCP0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf43Q5NCP0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Rnf43Q5NCP0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf43Q5NCP0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Rnf43Q5NCP0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.16■□□□□ 0.66
Rnf43Q5NCP0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.16■□□□□ 0.66
Rnf43Q5NCP0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf43Q5NCP0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.16■□□□□ 0.66
Rnf43Q5NCP0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf43Q5NCP0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf43Q5NCP0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf43Q5NCP0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf43Q5NCP0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rnf43Q5NCP0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf43Q5NCP0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf43Q5NCP0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.15■□□□□ 0.66
Rnf43Q5NCP0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf43Q5NCP0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf43Q5NCP0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf43Q5NCP0 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.15■□□□□ 0.66
Rnf43Q5NCP0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf43Q5NCP0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.15■□□□□ 0.66
Rnf43Q5NCP0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf43Q5NCP0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.15■□□□□ 0.66
Rnf43Q5NCP0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rnf43Q5NCP0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.14■□□□□ 0.65
Rnf43Q5NCP0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf43Q5NCP0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rnf43Q5NCP0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.14■□□□□ 0.65
Rnf43Q5NCP0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf43Q5NCP0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf43Q5NCP0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf43Q5NCP0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf43Q5NCP0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf43Q5NCP0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Rnf43Q5NCP0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf43Q5NCP0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.13■□□□□ 0.65
Rnf43Q5NCP0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf43Q5NCP0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf43Q5NCP0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.13■□□□□ 0.65
Rnf43Q5NCP0 Gm44549-201ENSMUST00000208351 577 ntBASIC19.13■□□□□ 0.65
Rnf43Q5NCP0 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.13■□□□□ 0.65
Rnf43Q5NCP0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.13■□□□□ 0.65
Rnf43Q5NCP0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rnf43Q5NCP0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf43Q5NCP0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf43Q5NCP0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf43Q5NCP0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf43Q5NCP0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf43Q5NCP0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf43Q5NCP0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.12■□□□□ 0.65
Rnf43Q5NCP0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf43Q5NCP0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf43Q5NCP0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rnf43Q5NCP0 Gm13836-201ENSMUST00000121159 501 ntBASIC19.12■□□□□ 0.65
Rnf43Q5NCP0 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.12■□□□□ 0.65
Rnf43Q5NCP0 Gm18666-201ENSMUST00000190039 958 ntBASIC19.12■□□□□ 0.65
Rnf43Q5NCP0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.12■□□□□ 0.65
Rnf43Q5NCP0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf43Q5NCP0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf43Q5NCP0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf43Q5NCP0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf43Q5NCP0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.12■□□□□ 0.65
Rnf43Q5NCP0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf43Q5NCP0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.11■□□□□ 0.65
Rnf43Q5NCP0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf43Q5NCP0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.11■□□□□ 0.65
Rnf43Q5NCP0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Rnf43Q5NCP0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf43Q5NCP0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf43Q5NCP0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf43Q5NCP0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf43Q5NCP0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf43Q5NCP0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.11■□□□□ 0.65
Rnf43Q5NCP0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf43Q5NCP0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.1■□□□□ 0.65
Rnf43Q5NCP0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.1■□□□□ 0.65
Rnf43Q5NCP0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf43Q5NCP0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
Rnf43Q5NCP0 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.1■□□□□ 0.65
Rnf43Q5NCP0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf43Q5NCP0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rnf43Q5NCP0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms