Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Vps13aQ5H8C4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Vps13aQ5H8C4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps13aQ5H8C4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps13aQ5H8C4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vps13aQ5H8C4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Vps13aQ5H8C4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vps13aQ5H8C4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps13aQ5H8C4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps13aQ5H8C4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Vps13aQ5H8C4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps13aQ5H8C4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps13aQ5H8C4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.89■□□□□ 0.61
Vps13aQ5H8C4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps13aQ5H8C4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps13aQ5H8C4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps13aQ5H8C4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps13aQ5H8C4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps13aQ5H8C4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vps13aQ5H8C4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Vps13aQ5H8C4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.89■□□□□ 0.61
Vps13aQ5H8C4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps13aQ5H8C4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps13aQ5H8C4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps13aQ5H8C4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps13aQ5H8C4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vps13aQ5H8C4 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.88■□□□□ 0.61
Vps13aQ5H8C4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vps13aQ5H8C4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps13aQ5H8C4 Gm30025-201ENSMUST00000218555 728 ntBASIC18.87■□□□□ 0.61
Vps13aQ5H8C4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Vps13aQ5H8C4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps13aQ5H8C4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.87■□□□□ 0.61
Vps13aQ5H8C4 Gm10013-201ENSMUST00000106074 672 ntBASIC18.87■□□□□ 0.61
Vps13aQ5H8C4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vps13aQ5H8C4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.87■□□□□ 0.61
Vps13aQ5H8C4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps13aQ5H8C4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps13aQ5H8C4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps13aQ5H8C4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps13aQ5H8C4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.87■□□□□ 0.61
Vps13aQ5H8C4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps13aQ5H8C4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vps13aQ5H8C4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vps13aQ5H8C4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vps13aQ5H8C4 Gm44771-201ENSMUST00000206975 626 ntBASIC18.87■□□□□ 0.61
Vps13aQ5H8C4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vps13aQ5H8C4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vps13aQ5H8C4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps13aQ5H8C4 Gm9103-201ENSMUST00000119371 405 ntBASIC18.86■□□□□ 0.61
Vps13aQ5H8C4 AA386476-201ENSMUST00000098781 1665 ntBASIC18.86■□□□□ 0.61
Vps13aQ5H8C4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps13aQ5H8C4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps13aQ5H8C4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps13aQ5H8C4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps13aQ5H8C4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps13aQ5H8C4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps13aQ5H8C4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vps13aQ5H8C4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps13aQ5H8C4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Vps13aQ5H8C4 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.85■□□□□ 0.61
Vps13aQ5H8C4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps13aQ5H8C4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Vps13aQ5H8C4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps13aQ5H8C4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vps13aQ5H8C4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps13aQ5H8C4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps13aQ5H8C4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.85■□□□□ 0.61
Vps13aQ5H8C4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Vps13aQ5H8C4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.85■□□□□ 0.61
Vps13aQ5H8C4 Gm13158-201ENSMUST00000122007 736 ntBASIC18.85■□□□□ 0.61
Vps13aQ5H8C4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Vps13aQ5H8C4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.85■□□□□ 0.61
Vps13aQ5H8C4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vps13aQ5H8C4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps13aQ5H8C4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps13aQ5H8C4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Vps13aQ5H8C4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.84■□□□□ 0.61
Vps13aQ5H8C4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps13aQ5H8C4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps13aQ5H8C4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps13aQ5H8C4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps13aQ5H8C4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps13aQ5H8C4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps13aQ5H8C4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.83■□□□□ 0.61
Vps13aQ5H8C4 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.83■□□□□ 0.61
Vps13aQ5H8C4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps13aQ5H8C4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Vps13aQ5H8C4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Vps13aQ5H8C4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps13aQ5H8C4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps13aQ5H8C4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.83■□□□□ 0.6
Vps13aQ5H8C4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps13aQ5H8C4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps13aQ5H8C4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.82■□□□□ 0.6
Vps13aQ5H8C4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.82■□□□□ 0.6
Vps13aQ5H8C4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps13aQ5H8C4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps13aQ5H8C4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps13aQ5H8C4 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms