Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Rc3h1Q4VGL6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Rc3h1Q4VGL6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rc3h1Q4VGL6 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.84■■□□□ 1.09
Rc3h1Q4VGL6 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.84■■□□□ 1.09
Rc3h1Q4VGL6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Rc3h1Q4VGL6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rc3h1Q4VGL6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rc3h1Q4VGL6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rc3h1Q4VGL6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rc3h1Q4VGL6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rc3h1Q4VGL6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rc3h1Q4VGL6 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.83■■□□□ 1.09
Rc3h1Q4VGL6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rc3h1Q4VGL6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rc3h1Q4VGL6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rc3h1Q4VGL6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rc3h1Q4VGL6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Rc3h1Q4VGL6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rc3h1Q4VGL6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rc3h1Q4VGL6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Rc3h1Q4VGL6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rc3h1Q4VGL6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Rc3h1Q4VGL6 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rc3h1Q4VGL6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rc3h1Q4VGL6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rc3h1Q4VGL6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rc3h1Q4VGL6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
Rc3h1Q4VGL6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rc3h1Q4VGL6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.82■■□□□ 1.08
Rc3h1Q4VGL6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rc3h1Q4VGL6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rc3h1Q4VGL6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rc3h1Q4VGL6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.82■■□□□ 1.08
Rc3h1Q4VGL6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rc3h1Q4VGL6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rc3h1Q4VGL6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rc3h1Q4VGL6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rc3h1Q4VGL6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rc3h1Q4VGL6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rc3h1Q4VGL6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Rc3h1Q4VGL6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rc3h1Q4VGL6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rc3h1Q4VGL6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.81■■□□□ 1.08
Rc3h1Q4VGL6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.81■■□□□ 1.08
Rc3h1Q4VGL6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rc3h1Q4VGL6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Rc3h1Q4VGL6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rc3h1Q4VGL6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Rc3h1Q4VGL6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.8■■□□□ 1.08
Rc3h1Q4VGL6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rc3h1Q4VGL6 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.8■■□□□ 1.08
Rc3h1Q4VGL6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rc3h1Q4VGL6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Rc3h1Q4VGL6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Rc3h1Q4VGL6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rc3h1Q4VGL6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rc3h1Q4VGL6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rc3h1Q4VGL6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rc3h1Q4VGL6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rc3h1Q4VGL6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rc3h1Q4VGL6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rc3h1Q4VGL6 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.79■■□□□ 1.08
Rc3h1Q4VGL6 Gm20049-201ENSMUST00000219950 730 ntBASIC21.79■■□□□ 1.08
Rc3h1Q4VGL6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Rc3h1Q4VGL6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rc3h1Q4VGL6 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Rc3h1Q4VGL6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rc3h1Q4VGL6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rc3h1Q4VGL6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rc3h1Q4VGL6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rc3h1Q4VGL6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rc3h1Q4VGL6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rc3h1Q4VGL6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rc3h1Q4VGL6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.78■■□□□ 1.08
Rc3h1Q4VGL6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Rc3h1Q4VGL6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rc3h1Q4VGL6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rc3h1Q4VGL6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rc3h1Q4VGL6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rc3h1Q4VGL6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
Rc3h1Q4VGL6 Rab3c-203ENSMUST00000224180 967 ntBASIC21.77■■□□□ 1.08
Rc3h1Q4VGL6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rc3h1Q4VGL6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rc3h1Q4VGL6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rc3h1Q4VGL6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Rc3h1Q4VGL6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Rc3h1Q4VGL6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.76■■□□□ 1.07
Rc3h1Q4VGL6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rc3h1Q4VGL6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rc3h1Q4VGL6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Rc3h1Q4VGL6 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.75■■□□□ 1.07
Rc3h1Q4VGL6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rc3h1Q4VGL6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Rc3h1Q4VGL6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rc3h1Q4VGL6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rc3h1Q4VGL6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rc3h1Q4VGL6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rc3h1Q4VGL6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rc3h1Q4VGL6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms