Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nlrc4Q3UP24 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nlrc4Q3UP24 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nlrc4Q3UP24 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nlrc4Q3UP24 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Nlrc4Q3UP24 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nlrc4Q3UP24 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nlrc4Q3UP24 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Nlrc4Q3UP24 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nlrc4Q3UP24 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nlrc4Q3UP24 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nlrc4Q3UP24 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Nlrc4Q3UP24 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.83■□□□□ 0.77
Nlrc4Q3UP24 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Nlrc4Q3UP24 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.83■□□□□ 0.77
Nlrc4Q3UP24 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Nlrc4Q3UP24 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nlrc4Q3UP24 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nlrc4Q3UP24 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nlrc4Q3UP24 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nlrc4Q3UP24 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.82■□□□□ 0.76
Nlrc4Q3UP24 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nlrc4Q3UP24 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nlrc4Q3UP24 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nlrc4Q3UP24 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nlrc4Q3UP24 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nlrc4Q3UP24 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.81■□□□□ 0.76
Nlrc4Q3UP24 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nlrc4Q3UP24 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nlrc4Q3UP24 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nlrc4Q3UP24 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nlrc4Q3UP24 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nlrc4Q3UP24 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.81■□□□□ 0.76
Nlrc4Q3UP24 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nlrc4Q3UP24 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nlrc4Q3UP24 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.81■□□□□ 0.76
Nlrc4Q3UP24 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nlrc4Q3UP24 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Nlrc4Q3UP24 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nlrc4Q3UP24 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nlrc4Q3UP24 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.81■□□□□ 0.76
Nlrc4Q3UP24 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nlrc4Q3UP24 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nlrc4Q3UP24 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nlrc4Q3UP24 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nlrc4Q3UP24 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Nlrc4Q3UP24 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nlrc4Q3UP24 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nlrc4Q3UP24 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Nlrc4Q3UP24 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nlrc4Q3UP24 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nlrc4Q3UP24 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.8■□□□□ 0.76
Nlrc4Q3UP24 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nlrc4Q3UP24 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nlrc4Q3UP24 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Nlrc4Q3UP24 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nlrc4Q3UP24 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nlrc4Q3UP24 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nlrc4Q3UP24 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nlrc4Q3UP24 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nlrc4Q3UP24 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nlrc4Q3UP24 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Nlrc4Q3UP24 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nlrc4Q3UP24 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nlrc4Q3UP24 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nlrc4Q3UP24 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nlrc4Q3UP24 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nlrc4Q3UP24 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nlrc4Q3UP24 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nlrc4Q3UP24 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nlrc4Q3UP24 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.78■□□□□ 0.76
Nlrc4Q3UP24 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Nlrc4Q3UP24 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nlrc4Q3UP24 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nlrc4Q3UP24 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nlrc4Q3UP24 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nlrc4Q3UP24 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nlrc4Q3UP24 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nlrc4Q3UP24 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nlrc4Q3UP24 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nlrc4Q3UP24 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Nlrc4Q3UP24 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Nlrc4Q3UP24 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nlrc4Q3UP24 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nlrc4Q3UP24 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nlrc4Q3UP24 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nlrc4Q3UP24 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Nlrc4Q3UP24 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nlrc4Q3UP24 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.76■□□□□ 0.75
Nlrc4Q3UP24 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.76■□□□□ 0.75
Nlrc4Q3UP24 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.76■□□□□ 0.75
Nlrc4Q3UP24 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nlrc4Q3UP24 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nlrc4Q3UP24 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nlrc4Q3UP24 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nlrc4Q3UP24 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nlrc4Q3UP24 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Nlrc4Q3UP24 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nlrc4Q3UP24 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nlrc4Q3UP24 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms