Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Naf1Q3UMQ8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Naf1Q3UMQ8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Naf1Q3UMQ8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Naf1Q3UMQ8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Naf1Q3UMQ8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 Gm12527-201ENSMUST00000117967 564 ntBASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 Gm10653-202ENSMUST00000139570 835 ntBASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Naf1Q3UMQ8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Naf1Q3UMQ8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Naf1Q3UMQ8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Naf1Q3UMQ8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Naf1Q3UMQ8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Naf1Q3UMQ8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Naf1Q3UMQ8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Naf1Q3UMQ8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.11■□□□□ 0.65
Naf1Q3UMQ8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Naf1Q3UMQ8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.11■□□□□ 0.65
Naf1Q3UMQ8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.11■□□□□ 0.65
Naf1Q3UMQ8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Naf1Q3UMQ8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.11■□□□□ 0.65
Naf1Q3UMQ8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Naf1Q3UMQ8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Naf1Q3UMQ8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.1■□□□□ 0.65
Naf1Q3UMQ8 Gm26524-201ENSMUST00000192339 390 ntBASIC19.1■□□□□ 0.65
Naf1Q3UMQ8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.1■□□□□ 0.65
Naf1Q3UMQ8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Naf1Q3UMQ8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Naf1Q3UMQ8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Naf1Q3UMQ8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Naf1Q3UMQ8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Naf1Q3UMQ8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Naf1Q3UMQ8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Naf1Q3UMQ8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Naf1Q3UMQ8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Naf1Q3UMQ8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Naf1Q3UMQ8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Naf1Q3UMQ8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Naf1Q3UMQ8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Naf1Q3UMQ8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Naf1Q3UMQ8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Naf1Q3UMQ8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Naf1Q3UMQ8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Naf1Q3UMQ8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Naf1Q3UMQ8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Naf1Q3UMQ8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Naf1Q3UMQ8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Naf1Q3UMQ8 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.09■□□□□ 0.65
Naf1Q3UMQ8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Naf1Q3UMQ8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Naf1Q3UMQ8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Naf1Q3UMQ8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Naf1Q3UMQ8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Naf1Q3UMQ8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.08■□□□□ 0.64
Naf1Q3UMQ8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Naf1Q3UMQ8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Naf1Q3UMQ8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Naf1Q3UMQ8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Naf1Q3UMQ8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Naf1Q3UMQ8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Naf1Q3UMQ8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Naf1Q3UMQ8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Naf1Q3UMQ8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.07■□□□□ 0.64
Naf1Q3UMQ8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
Naf1Q3UMQ8 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.07■□□□□ 0.64
Naf1Q3UMQ8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Naf1Q3UMQ8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Naf1Q3UMQ8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Naf1Q3UMQ8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Naf1Q3UMQ8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Naf1Q3UMQ8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Naf1Q3UMQ8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Naf1Q3UMQ8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Naf1Q3UMQ8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Naf1Q3UMQ8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Naf1Q3UMQ8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.06■□□□□ 0.64
Naf1Q3UMQ8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Naf1Q3UMQ8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Naf1Q3UMQ8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Naf1Q3UMQ8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Naf1Q3UMQ8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Naf1Q3UMQ8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Naf1Q3UMQ8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms