Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smcr8Q3UMB5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Smcr8Q3UMB5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smcr8Q3UMB5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smcr8Q3UMB5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smcr8Q3UMB5 Gm10653-202ENSMUST00000139570 835 ntBASIC20.2■□□□□ 0.82
Smcr8Q3UMB5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smcr8Q3UMB5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.2■□□□□ 0.82
Smcr8Q3UMB5 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smcr8Q3UMB5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smcr8Q3UMB5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Smcr8Q3UMB5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Smcr8Q3UMB5 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smcr8Q3UMB5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smcr8Q3UMB5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smcr8Q3UMB5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smcr8Q3UMB5 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smcr8Q3UMB5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smcr8Q3UMB5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.19■□□□□ 0.82
Smcr8Q3UMB5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Smcr8Q3UMB5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smcr8Q3UMB5 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smcr8Q3UMB5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smcr8Q3UMB5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smcr8Q3UMB5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smcr8Q3UMB5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smcr8Q3UMB5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smcr8Q3UMB5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.18■□□□□ 0.82
Smcr8Q3UMB5 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smcr8Q3UMB5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
Smcr8Q3UMB5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.18■□□□□ 0.82
Smcr8Q3UMB5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smcr8Q3UMB5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.18■□□□□ 0.82
Smcr8Q3UMB5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smcr8Q3UMB5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Smcr8Q3UMB5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smcr8Q3UMB5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smcr8Q3UMB5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smcr8Q3UMB5 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Smcr8Q3UMB5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smcr8Q3UMB5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smcr8Q3UMB5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smcr8Q3UMB5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smcr8Q3UMB5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Smcr8Q3UMB5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smcr8Q3UMB5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.17■□□□□ 0.82
Smcr8Q3UMB5 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smcr8Q3UMB5 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Smcr8Q3UMB5 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smcr8Q3UMB5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.16■□□□□ 0.82
Smcr8Q3UMB5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.16■□□□□ 0.82
Smcr8Q3UMB5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smcr8Q3UMB5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Smcr8Q3UMB5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smcr8Q3UMB5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smcr8Q3UMB5 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.15■□□□□ 0.82
Smcr8Q3UMB5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Smcr8Q3UMB5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smcr8Q3UMB5 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smcr8Q3UMB5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Smcr8Q3UMB5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smcr8Q3UMB5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smcr8Q3UMB5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smcr8Q3UMB5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Smcr8Q3UMB5 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smcr8Q3UMB5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smcr8Q3UMB5 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smcr8Q3UMB5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Smcr8Q3UMB5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smcr8Q3UMB5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smcr8Q3UMB5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smcr8Q3UMB5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smcr8Q3UMB5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smcr8Q3UMB5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Smcr8Q3UMB5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smcr8Q3UMB5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smcr8Q3UMB5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Smcr8Q3UMB5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smcr8Q3UMB5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smcr8Q3UMB5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Smcr8Q3UMB5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smcr8Q3UMB5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.13■□□□□ 0.81
Smcr8Q3UMB5 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.13■□□□□ 0.81
Smcr8Q3UMB5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smcr8Q3UMB5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Smcr8Q3UMB5 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Smcr8Q3UMB5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smcr8Q3UMB5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Smcr8Q3UMB5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smcr8Q3UMB5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smcr8Q3UMB5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smcr8Q3UMB5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smcr8Q3UMB5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smcr8Q3UMB5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smcr8Q3UMB5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smcr8Q3UMB5 Gm12527-201ENSMUST00000117967 564 ntBASIC20.12■□□□□ 0.81
Smcr8Q3UMB5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Smcr8Q3UMB5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smcr8Q3UMB5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Smcr8Q3UMB5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms