Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col5a2Q3U962 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col5a2Q3U962 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col5a2Q3U962 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Col5a2Q3U962 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Col5a2Q3U962 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC22.58■■□□□ 1.2
Col5a2Q3U962 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC22.58■■□□□ 1.2
Col5a2Q3U962 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.58■■□□□ 1.2
Col5a2Q3U962 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Col5a2Q3U962 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col5a2Q3U962 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC22.57■■□□□ 1.2
Col5a2Q3U962 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Col5a2Q3U962 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col5a2Q3U962 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col5a2Q3U962 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col5a2Q3U962 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Col5a2Q3U962 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Col5a2Q3U962 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Col5a2Q3U962 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col5a2Q3U962 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Col5a2Q3U962 Gm21362-201ENSMUST00000194272 928 ntBASIC22.56■■□□□ 1.2
Col5a2Q3U962 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Col5a2Q3U962 Gm20100-201ENSMUST00000209418 2272 ntBASIC22.56■■□□□ 1.2
Col5a2Q3U962 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Col5a2Q3U962 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Col5a2Q3U962 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col5a2Q3U962 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col5a2Q3U962 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col5a2Q3U962 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Col5a2Q3U962 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Col5a2Q3U962 Gm19094-201ENSMUST00000209791 1246 ntBASIC22.55■■□□□ 1.2
Col5a2Q3U962 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col5a2Q3U962 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col5a2Q3U962 Gm32699-201ENSMUST00000221728 1988 ntBASIC22.55■■□□□ 1.2
Col5a2Q3U962 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col5a2Q3U962 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col5a2Q3U962 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Col5a2Q3U962 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col5a2Q3U962 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col5a2Q3U962 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col5a2Q3U962 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col5a2Q3U962 Gm6659-201ENSMUST00000174752 547 ntBASIC22.54■■□□□ 1.2
Col5a2Q3U962 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
Col5a2Q3U962 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Col5a2Q3U962 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Col5a2Q3U962 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col5a2Q3U962 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col5a2Q3U962 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Col5a2Q3U962 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Col5a2Q3U962 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Col5a2Q3U962 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC22.54■■□□□ 1.2
Col5a2Q3U962 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Col5a2Q3U962 Gm13559-201ENSMUST00000120476 863 ntBASIC22.54■■□□□ 1.2
Col5a2Q3U962 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC22.54■■□□□ 1.2
Col5a2Q3U962 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col5a2Q3U962 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col5a2Q3U962 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col5a2Q3U962 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Col5a2Q3U962 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col5a2Q3U962 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Col5a2Q3U962 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col5a2Q3U962 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Col5a2Q3U962 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col5a2Q3U962 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Col5a2Q3U962 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col5a2Q3U962 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col5a2Q3U962 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col5a2Q3U962 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col5a2Q3U962 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Col5a2Q3U962 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
Col5a2Q3U962 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
Col5a2Q3U962 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col5a2Q3U962 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC22.51■■□□□ 1.19
Col5a2Q3U962 Gm16042-201ENSMUST00000204813 1247 ntBASIC22.51■■□□□ 1.19
Col5a2Q3U962 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Col5a2Q3U962 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
Col5a2Q3U962 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Col5a2Q3U962 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col5a2Q3U962 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Col5a2Q3U962 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col5a2Q3U962 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
Col5a2Q3U962 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC22.5■■□□□ 1.19
Col5a2Q3U962 Arhgef4-208ENSMUST00000211073 171 ntBASIC22.5■■□□□ 1.19
Col5a2Q3U962 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col5a2Q3U962 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col5a2Q3U962 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col5a2Q3U962 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col5a2Q3U962 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Col5a2Q3U962 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col5a2Q3U962 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col5a2Q3U962 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col5a2Q3U962 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col5a2Q3U962 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col5a2Q3U962 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col5a2Q3U962 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col5a2Q3U962 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col5a2Q3U962 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Col5a2Q3U962 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Col5a2Q3U962 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col5a2Q3U962 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms