Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Ush2AQ2QI47 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC10.24□□□□□ -0.77
Ush2AQ2QI47 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ush2AQ2QI47 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ush2AQ2QI47 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Ush2AQ2QI47 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ush2AQ2QI47 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC10.24□□□□□ -0.77
Ush2AQ2QI47 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC10.24□□□□□ -0.77
Ush2AQ2QI47 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC10.24□□□□□ -0.77
Ush2AQ2QI47 Gm18025-201ENSMUST00000221733 862 ntBASIC10.24□□□□□ -0.77
Ush2AQ2QI47 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ush2AQ2QI47 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 Gm7791-201ENSMUST00000219066 539 ntBASIC10.23□□□□□ -0.77
Ush2AQ2QI47 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ush2AQ2QI47 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 AC124581.1-201ENSMUST00000225416 1399 ntBASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Gm6802-201ENSMUST00000167843 1983 ntBASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Gm5587-201ENSMUST00000206270 674 ntBASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Gm7370-201ENSMUST00000219471 767 ntBASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Ush2AQ2QI47 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ush2AQ2QI47 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ush2AQ2QI47 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC10.21□□□□□ -0.77
Ush2AQ2QI47 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC10.21□□□□□ -0.77
Ush2AQ2QI47 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ush2AQ2QI47 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ush2AQ2QI47 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ush2AQ2QI47 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ush2AQ2QI47 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ush2AQ2QI47 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ush2AQ2QI47 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ush2AQ2QI47 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC10.21□□□□□ -0.78
Ush2AQ2QI47 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ush2AQ2QI47 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ush2AQ2QI47 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC10.21□□□□□ -0.78
Ush2AQ2QI47 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ush2AQ2QI47 Gm29518-201ENSMUST00000190858 372 ntBASIC10.2□□□□□ -0.78
Ush2AQ2QI47 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Ush2AQ2QI47 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Ush2AQ2QI47 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Ush2AQ2QI47 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ush2AQ2QI47 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ush2AQ2QI47 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ush2AQ2QI47 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Ush2AQ2QI47 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ush2AQ2QI47 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ush2AQ2QI47 Gm5864-201ENSMUST00000202263 970 ntBASIC10.2□□□□□ -0.78
Ush2AQ2QI47 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC10.2□□□□□ -0.78
Ush2AQ2QI47 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC10.2□□□□□ -0.78
Ush2AQ2QI47 Gm7860-201ENSMUST00000121190 879 ntBASIC10.2□□□□□ -0.78
Ush2AQ2QI47 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ush2AQ2QI47 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms