Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim72Q1XH17 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim72Q1XH17 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim72Q1XH17 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Trim72Q1XH17 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim72Q1XH17 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim72Q1XH17 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim72Q1XH17 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim72Q1XH17 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
Trim72Q1XH17 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim72Q1XH17 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim72Q1XH17 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim72Q1XH17 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim72Q1XH17 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim72Q1XH17 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim72Q1XH17 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim72Q1XH17 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim72Q1XH17 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim72Q1XH17 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim72Q1XH17 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.06■□□□□ 0.8
Trim72Q1XH17 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim72Q1XH17 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.06■□□□□ 0.8
Trim72Q1XH17 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim72Q1XH17 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim72Q1XH17 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim72Q1XH17 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim72Q1XH17 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim72Q1XH17 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim72Q1XH17 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim72Q1XH17 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trim72Q1XH17 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim72Q1XH17 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim72Q1XH17 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim72Q1XH17 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trim72Q1XH17 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim72Q1XH17 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim72Q1XH17 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim72Q1XH17 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim72Q1XH17 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trim72Q1XH17 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trim72Q1XH17 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim72Q1XH17 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim72Q1XH17 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim72Q1XH17 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim72Q1XH17 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim72Q1XH17 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim72Q1XH17 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim72Q1XH17 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
Trim72Q1XH17 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim72Q1XH17 Gm13534-201ENSMUST00000121169 513 ntBASIC20.04■□□□□ 0.8
Trim72Q1XH17 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim72Q1XH17 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim72Q1XH17 Gm5874-201ENSMUST00000096101 508 ntBASIC20.04■□□□□ 0.8
Trim72Q1XH17 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim72Q1XH17 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim72Q1XH17 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim72Q1XH17 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim72Q1XH17 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim72Q1XH17 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim72Q1XH17 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trim72Q1XH17 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim72Q1XH17 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim72Q1XH17 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Trim72Q1XH17 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.03■□□□□ 0.8
Trim72Q1XH17 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trim72Q1XH17 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
Trim72Q1XH17 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim72Q1XH17 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.03■□□□□ 0.8
Trim72Q1XH17 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim72Q1XH17 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim72Q1XH17 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim72Q1XH17 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim72Q1XH17 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim72Q1XH17 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Trim72Q1XH17 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim72Q1XH17 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim72Q1XH17 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim72Q1XH17 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim72Q1XH17 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim72Q1XH17 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim72Q1XH17 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim72Q1XH17 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim72Q1XH17 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim72Q1XH17 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.02■□□□□ 0.8
Trim72Q1XH17 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim72Q1XH17 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.02■□□□□ 0.8
Trim72Q1XH17 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim72Q1XH17 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim72Q1XH17 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim72Q1XH17 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim72Q1XH17 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Trim72Q1XH17 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim72Q1XH17 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim72Q1XH17 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Trim72Q1XH17 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim72Q1XH17 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim72Q1XH17 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trim72Q1XH17 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim72Q1XH17 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim72Q1XH17 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms