Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf1Q07802 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ebf1Q07802 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf1Q07802 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf1Q07802 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf1Q07802 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf1Q07802 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.03■□□□□ 0.64
Ebf1Q07802 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.03■□□□□ 0.64
Ebf1Q07802 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ebf1Q07802 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf1Q07802 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf1Q07802 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Ebf1Q07802 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf1Q07802 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf1Q07802 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf1Q07802 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf1Q07802 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
Ebf1Q07802 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.02■□□□□ 0.64
Ebf1Q07802 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf1Q07802 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Ebf1Q07802 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ebf1Q07802 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ebf1Q07802 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.02■□□□□ 0.63
Ebf1Q07802 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf1Q07802 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf1Q07802 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf1Q07802 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf1Q07802 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.01■□□□□ 0.63
Ebf1Q07802 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.01■□□□□ 0.63
Ebf1Q07802 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf1Q07802 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.01■□□□□ 0.63
Ebf1Q07802 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf1Q07802 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf1Q07802 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf1Q07802 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf1Q07802 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ebf1Q07802 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf1Q07802 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf1Q07802 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.01■□□□□ 0.63
Ebf1Q07802 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf1Q07802 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf1Q07802 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ebf1Q07802 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Ebf1Q07802 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ebf1Q07802 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Ebf1Q07802 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Ebf1Q07802 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ebf1Q07802 Rab3c-203ENSMUST00000224180 967 ntBASIC19■□□□□ 0.63
Ebf1Q07802 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19■□□□□ 0.63
Ebf1Q07802 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19■□□□□ 0.63
Ebf1Q07802 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ebf1Q07802 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ebf1Q07802 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ebf1Q07802 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ebf1Q07802 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ebf1Q07802 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ebf1Q07802 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Ebf1Q07802 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Ebf1Q07802 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19■□□□□ 0.63
Ebf1Q07802 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ebf1Q07802 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf1Q07802 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf1Q07802 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf1Q07802 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf1Q07802 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf1Q07802 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Ebf1Q07802 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ebf1Q07802 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf1Q07802 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.99■□□□□ 0.63
Ebf1Q07802 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf1Q07802 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf1Q07802 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ebf1Q07802 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf1Q07802 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf1Q07802 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf1Q07802 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf1Q07802 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf1Q07802 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf1Q07802 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.98■□□□□ 0.63
Ebf1Q07802 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf1Q07802 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ebf1Q07802 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ebf1Q07802 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf1Q07802 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf1Q07802 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.98■□□□□ 0.63
Ebf1Q07802 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf1Q07802 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ebf1Q07802 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ebf1Q07802 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ebf1Q07802 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ebf1Q07802 Gm7860-201ENSMUST00000121190 879 ntBASIC18.97■□□□□ 0.63
Ebf1Q07802 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ebf1Q07802 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.97■□□□□ 0.63
Ebf1Q07802 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.97■□□□□ 0.63
Ebf1Q07802 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ebf1Q07802 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.97■□□□□ 0.63
Ebf1Q07802 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ebf1Q07802 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ebf1Q07802 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf1Q07802 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms