Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smad4P97471 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.99■□□□□ 0.63
Smad4P97471 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Smad4P97471 Odf3b-204ENSMUST00000227834 930 ntBASIC18.99■□□□□ 0.63
Smad4P97471 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.99■□□□□ 0.63
Smad4P97471 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.99■□□□□ 0.63
Smad4P97471 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smad4P97471 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smad4P97471 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smad4P97471 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Smad4P97471 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Smad4P97471 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
Smad4P97471 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Smad4P97471 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smad4P97471 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smad4P97471 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smad4P97471 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.98■□□□□ 0.63
Smad4P97471 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Smad4P97471 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Smad4P97471 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.97■□□□□ 0.63
Smad4P97471 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smad4P97471 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Smad4P97471 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smad4P97471 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smad4P97471 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smad4P97471 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smad4P97471 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smad4P97471 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smad4P97471 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smad4P97471 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smad4P97471 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smad4P97471 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Smad4P97471 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.96■□□□□ 0.63
Smad4P97471 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smad4P97471 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smad4P97471 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smad4P97471 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smad4P97471 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smad4P97471 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Smad4P97471 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smad4P97471 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smad4P97471 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smad4P97471 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smad4P97471 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smad4P97471 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smad4P97471 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.95■□□□□ 0.62
Smad4P97471 Gm23634-201ENSMUST00000175071 91 ntBASIC18.95■□□□□ 0.62
Smad4P97471 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smad4P97471 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smad4P97471 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smad4P97471 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.94■□□□□ 0.62
Smad4P97471 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smad4P97471 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smad4P97471 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.94■□□□□ 0.62
Smad4P97471 Timm23-208ENSMUST00000226683 750 ntBASIC18.94■□□□□ 0.62
Smad4P97471 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Smad4P97471 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Smad4P97471 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smad4P97471 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Smad4P97471 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Smad4P97471 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.94■□□□□ 0.62
Smad4P97471 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.94■□□□□ 0.62
Smad4P97471 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smad4P97471 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smad4P97471 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Smad4P97471 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smad4P97471 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Smad4P97471 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smad4P97471 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smad4P97471 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.93■□□□□ 0.62
Smad4P97471 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smad4P97471 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smad4P97471 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smad4P97471 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smad4P97471 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Smad4P97471 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smad4P97471 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smad4P97471 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smad4P97471 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smad4P97471 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smad4P97471 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smad4P97471 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smad4P97471 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smad4P97471 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smad4P97471 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smad4P97471 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smad4P97471 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smad4P97471 Gm33142-201ENSMUST00000193913 867 ntBASIC18.91■□□□□ 0.62
Smad4P97471 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.91■□□□□ 0.62
Smad4P97471 Gm3375-201ENSMUST00000203929 796 ntBASIC18.91■□□□□ 0.62
Smad4P97471 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smad4P97471 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smad4P97471 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smad4P97471 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smad4P97471 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smad4P97471 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smad4P97471 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smad4P97471 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smad4P97471 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smad4P97471 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms