Protein–RNA interactions for Protein: P97357

Taf1a, TATA box-binding protein-associated factor RNA polymerase I subunit A, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1aP97357 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Taf1aP97357 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Taf1aP97357 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.35■□□□□ 0.37
Taf1aP97357 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.35■□□□□ 0.37
Taf1aP97357 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Taf1aP97357 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Taf1aP97357 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Taf1aP97357 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.35■□□□□ 0.37
Taf1aP97357 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Taf1aP97357 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Taf1aP97357 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Taf1aP97357 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Taf1aP97357 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Taf1aP97357 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Taf1aP97357 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Taf1aP97357 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Taf1aP97357 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Taf1aP97357 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Taf1aP97357 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Taf1aP97357 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.34■□□□□ 0.37
Taf1aP97357 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Taf1aP97357 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Taf1aP97357 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Taf1aP97357 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.34■□□□□ 0.37
Taf1aP97357 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Taf1aP97357 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Taf1aP97357 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Taf1aP97357 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Taf1aP97357 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Taf1aP97357 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
Taf1aP97357 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Taf1aP97357 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Taf1aP97357 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Taf1aP97357 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.33■□□□□ 0.36
Taf1aP97357 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Taf1aP97357 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Taf1aP97357 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.33■□□□□ 0.36
Taf1aP97357 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Taf1aP97357 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Taf1aP97357 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Taf1aP97357 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Taf1aP97357 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Taf1aP97357 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Taf1aP97357 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.32■□□□□ 0.36
Taf1aP97357 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.32■□□□□ 0.36
Taf1aP97357 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.32■□□□□ 0.36
Taf1aP97357 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.32■□□□□ 0.36
Taf1aP97357 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Taf1aP97357 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Taf1aP97357 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Taf1aP97357 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Taf1aP97357 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Taf1aP97357 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Taf1aP97357 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.31■□□□□ 0.36
Taf1aP97357 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Taf1aP97357 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Taf1aP97357 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.31■□□□□ 0.36
Taf1aP97357 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Taf1aP97357 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Taf1aP97357 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Taf1aP97357 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Taf1aP97357 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Taf1aP97357 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Taf1aP97357 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Taf1aP97357 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.31■□□□□ 0.36
Taf1aP97357 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Taf1aP97357 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Taf1aP97357 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Taf1aP97357 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Taf1aP97357 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Taf1aP97357 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Taf1aP97357 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.3■□□□□ 0.36
Taf1aP97357 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Taf1aP97357 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Taf1aP97357 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Taf1aP97357 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Taf1aP97357 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Taf1aP97357 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Taf1aP97357 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Taf1aP97357 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Taf1aP97357 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Taf1aP97357 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Taf1aP97357 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Taf1aP97357 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Taf1aP97357 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Taf1aP97357 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.29■□□□□ 0.36
Taf1aP97357 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Taf1aP97357 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Taf1aP97357 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Taf1aP97357 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Taf1aP97357 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Taf1aP97357 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Taf1aP97357 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Taf1aP97357 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Taf1aP97357 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Taf1aP97357 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Taf1aP97357 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Taf1aP97357 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Taf1aP97357 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Taf1aP97357 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms